Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1398 ATGACCACGTGAGGAGGTGAGGCCATGACTTCTATATTGAACTCCATTCTTGGATCCCCTGAAGATGGTTCTATAGATTCCATCACACTATTTGTTGTTCTCCTGCTTACTTGTGTTGTGATTGGACATCTTCTGGAAAAGAGCCGGTGGATGACTGAGTCACTCATCGCATTATTCATTGGCCTTTTAAGTGGAACCGTCATTCTACTAACATCTAAGGGGAAAAATTCACACATTTTAGTATTTAATGAGGAACTTTTTTTCATATATCTTCTTCCACCTATTATATTTAATGCAGGGTTCCAGGTGAAAAGGAAGCAATTTTTTGACAACTTCATCCCAATATTTTTGTATGGTGTTTTTGGGAGTTTGATGTCATTTATCATCATATCACTAGGTGCGAATCAATTATTTAAAGGATTAGACATTGGTGTATTGGATCTTGGGGATTATTTAGCACTTGGAGCAATATTTTCAGCCACAGATTCGGTCTGCACATTGCAGGTGCTAGATCAGGAAGAGACGCCCCATCTGTACAGTTTAGTTTTTGGTGAAGGCGTAGTCAATGATGCAACATCAGTGGTTCTTTTCAATGCAATTCTAAGATTTGACCTCTCTCATATCACCTCGGCCAATATCTGGCAGTTTGTTGTCCATTTCGGATATTTATTCATGACAAGCGCCGTCCTTGGAGTAGGGGTTGGCTTGATTAGTGCAATCCTTATAAAGAAGTTGTATTTTGACAGGCACTCTACAGATGGAGAAATTGCTCTGATGATGCTAATGGCTTATTTATCTTATATGTTGTCTGAACTCTGTAATTTAAGTGGGATCCTCACCGTGTTCCTTTGTGGGATTGTCATGTCACACTACACGTGGCATGGTATTTCTGATTGTTCTAAAGTTACAAGCAGGCATGCTTTTGCAACTTTCTCATTTCTCGCCGAGATTTTTATCTTCGTATATGTTGGCATGGATGCCTTGGACATGGAGAAATGGAAATTTGCCAGCCAGAGTCCTTCTACATTAGTTGGGGCAAGTGGGATCCTGTTAGGCTTGGTTCTGCTCGGAAGGGCGGCTTTCGTGTATCCCCTGTCAGCTCTAGCTAATTTATTTAGGAAGTTTGACGATGACAAGATTACATTTAAGCAGATGGTTGTCATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCTGTGGCACTTGCATACAATAAGTTTACTAGATCAGGACATACTCAACTGCGGGGAAATGCCATCTTGATTACCAGCACCATCATAGTTGTTCTCTTAACTAATGTGGTTGGAGGATTACTGACTAAGCCTCTGATGAGGCTATTGTTGAATCCCTCTAAGGATGTTAAGGTCTTGGCTCAGCCGTTACTCGATGACGGGAATGATTCAGAATCTAACGTAGATATCGGTAATCCTCTCGATTCTAATCATATTGTTCATCACTACTGGCGAATCTTCGATGATTCATTTATGCGCCCTGTTTTTGGAGGGAGAGGATTTGCTCCTGTTGTTCCCAGTTCTGAAACAGATGTGATTCTGTCAGTGAAGCAGAAGAAAGCTCAAATGACGAAGGATCAACCCCCACACTGGTGGTGGCTGGACAATCACAGCACCATTAGACAATCCCCTTGGCTCCAATCCACTCTTGCTGAGCTGAATGAAAAGACCAAGACAATATTAGAACTAATAGAGGAAGATGCAGATTCCTTTGCGCAAAATGCAGAAATGTATTACAAGAAGCGACCCGAGCTTATCCGCATGGTCGAAGATTTCTATAGGACTCAGCGATCATTAGCTGAGCACTATGATCAAATCAAATCTGACACTGGAATTCGCCTTCTCACAACAGGGGCATCCCCATTTCCTTCGACCAAATACCAATCAGACAACAACGTAATGGGTTTTAAGGAAAGAAGTTATGACGGCTATTCCGAGAATGGTGATGCTGAGGAATCTGTGGAGTCTGAATTTGATGATTCTGAGCCGAGGTTAACTACCAAATTTGCTGAAGATGATGATGACCTGATGAGGTTGGGGGAAGAAATTGAGAGACTCAGGGAAGAGAACAGGGCTTACAAGAATCAACTCAACCAGAAAGATACCATAAATGATGAAGTAATGATCTTGAAAGAACTAGTAGAAGGACTCAGAGAAGAGAACAGGGCTTATAAGGATGAACTGAAGCTGAAAGATTCCTTGTGTAATGAAGTAACGATATTGAGAGAAGACATAAAAAGATTCAGAGAAGAAAACAGAGAACAGAGGGATCAACTCAAGGAGAAAGATGAAGATAAAATAAAAGTGATAAGACATCTGAGCTTAGCAATAGATTTGCTGAGAGAGGAGAATGCGAAGATGAGAATCTATATTGCTAAGGACTACAACAAGAAATGGAGGAACCCATTTGAGTTCAACAAACTCAAGAGAGCCATGTCATGGGACTTGTTTAATGGTCAAAGGAAACCCTAG 2484 0.413 MTTXGGEAMTSILNSILGSPEDGSIDSITLFVVLLLTCVVIGHLLEKSRWMTESLIALFIGLLSGTVILLTSKGKNSHILVFNEELFFIYLLPPIIFNAGFQVKRKQFFDNFIPIFLYGVFGSLMSFIIISLGANQLFKGLDIGVLDLGDYLALGAIFSATDSVCTLQVLDQEETPHLYSLVFGEGVVNDATSVVLFNAILRFDLSHITSANIWQFVVHFGYLFMTSAVLGVGVGLISAILIKKLYFDRHSTDGEIALMMLMAYLSYMLSELCNLSGILTVFLCGIVMSHYTWHGISDCSKVTSRHAFATFSFLAEIFIFVYVGMDALDMEKWKFASQSPSTLVGASGILLGLVLLGRAAFVYPLSALANLFRKFDDDKITFKQMVVIWWAGLMRGAVSVALAYNKFTRSGHTQLRGNAILITSTIIVVLLTNVVGGLLTKPLMRLLLNPSKDVKVLAQPLLDDGNDSESNVDIGNPLDSNHIVHHYWRIFDDSFMRPVFGGRGFAPVVPSSETDVILSVKQKKAQMTKDQPPHWWWLDNHSTIRQSPWLQSTLAELNEKTKTILELIEEDADSFAQNAEMYYKKRPELIRMVEDFYRTQRSLAEHYDQIKSDTGIRLLTTGASPFPSTKYQSDNNVMGFKERSYDGYSENGDAEESVESEFDDSEPRLTTKFAEDDDDLMRLGEEIERLREENRAYKNQLNQKDTINDEVMILKELVEGLREENRAYKDELKLKDSLCNEVTILREDIKRFREENREQRDQLKEKDEDKIKVIRHLSLAIDLLREENAKMRIYIAKDYNKKWRNPFEFNKLKRAMSWDLFNGQRKP 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1398 827 Pfam Sodium/hydrogen exchanger family 32 445 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele06g1398 827 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 533 614 IPR011684 GO:0003779
Lele06g1398 827 Coils Coil 735 769 - -
Lele06g1398 827 Pfam KIP1-like protein 535 608 IPR011684 GO:0003779
Lele06g1398 827 Coils Coil 550 570 - -
Lele06g1398 827 Gene3D - 148 199 - -
Lele06g1398 827 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele06g1398 827 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele06g1398 827 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele06g1398 827 PRINTS Na+/H+ exchanger signature 155 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele06g1398 827 PANTHER SODIUM/HYDROGEN EXCHANGER 20 568 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele06g1398 827 Coils Coil 673 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1398 Lele-ChrLele06 8994984 9004462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1398 8 515 Antiporters AT3G05030 62.852 0.0 666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1398 06 8994984 9004462 Lele06g1398 06 8994984 9004462 ECH
Lele06g1398 06 8994984 9004462 Lele07g1607 07 9944498 9945946 hybridization
Lele06g1398 06 8994984 9004462 Lele08g1396 08 8941368 8942759 hybridization