Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1394 ATGAAGGAGAGTTACAGGCGTTACTGCAACAGTAACTGCATCACGCAATACGAAGAGAGGGAGAAGAGGGCCCCCCCGGCTGGCGTGGTAATGGTGGTGAGGATCGTTGAGGGGAGAGAGGAGGAGGAATCTGAAACAGGGTGCCATTTACTTCCCTTGAGACACCAGAGGAGGATGAATGGTGTAGCTGCTGCGAACAAAGGATCTTCAGCGAATAACTCCCCAAACAATCGTGACGGAGCCCCGACATTTAACTACGGCGACCTCTCCCTGGAAGGTGAGAAAGATGTGTTGAATGATTCACTGTGGAAAGCATGCGCCGGCGCTTCTGTCATTGTTCCTCGCACTGGCGACTTGGTCTTCTATTTTCCTCAGGGCCACCTGGAACAGGTGGCTGAATTTACTCGGCAGGATGGTCACATGGAACTTCCTGCTTGTGATTTGCCTTCTAAAATCCTTTGCAGGGTCATGGGTGTTCAACTAAAGGCTGAAGCCAACACAGACGAGGTTTTCGCTCAAATTACTTTAATCCCTGAATCAAAGCTAGATGAAGTTAGTTCAGATGATAAAGGGTCTCGGCTGAAACCCAGAACTACTTCCAAGTGCTTCAGTAAGACGCTCACCCTATCAGATACAGGTGCACATGGTGGATTCTCCATTCCTAAGAAACTTGCCGAGGAATGTTTCCCACCTCTGGATATGTCTCAGCAACCACCAGGACAAGAACTCATTGCAAAGGACTTGCATGGTAACAAATGGAAATTTCGCCACACCTATCGGGGTCAGCCGAAACGACACCTGCTTACGGGTGGCTGGAGTTCGTTCCTCCATTCAAAAAAGCTTGAACCCGGAGATACATGCATTTTTCTTTGCGGAGAGAAGGGAGAAATTGGGATTGGGATCCGTCGAGCACTTAAACAACACAACAAAGCATCTTCATCCACATGCGTGATATCTGGCCATAGCATGCAACTCGGGATATTGGCCACTGCTTCTTATGCTGTTGCTACTGGATCCATGTTTACTGTCTACTACCGTCCTTGGACTTGTCCCTCTGAATTCATTGTTCCACTGGGTCACTACATGAAGCCCAATAAAGCGAAATATTCATGTGGGATGAAGATACAAATGCAGTTTGAAGTCGAAGAATCTACAAGGAGATATGCAGGAACTATAATAGGTATTGATGATATTGATGGCATGAAGTGGCCTGCTTCAGAATGGAGATGTCTCAAGGTGAAATGGGATGCCAAGCTTGATATAGATTTGCGTCCTGAAAGGGTTTGTCCATGGAACATTGAGCCCTTGGAATCTTCCGGGAAGAACATTCCTAATCTAGCCCCACCAAAGAGGCCACGTCTACTCGGCCCATCAATGTCTGGATTATTCGATCTTACCAAGGATGACATCGATCTGAACTCAGCCAACAATGCATCTCAGAGATGTGAAAGGGACTTACAAGGTCAAGATTACAAAGATGTAGGCTTCCAACAATATGACTCACAGTTCAGGACGAAGAATAAGCCACACTTTCAACTGCAAATCCCTCCTTGCCATTCTCTTGGTGGCTCAGCATCATTTCCAGAGGATGACATTTCAACTTCAAGTCCCCACAAACAGCCCCCAATCCCAACCACTTATGACGCATGTCATAATGTCCCCGTCACCAAGTACCTTTCACTCTCAAATGTGAATTCCAATGATTCTGAATCCCAGGGATGGCGGGCGTCTGGATCGAGGGATGAGAATGATAGTAAAACTGAATACAAGCTTTTCGGGATAAGCTTAAACCACCCGGAGCTCCCTTCACCACAAGTTGCTGCTTCTAGCAGTACTTCAACCCTTCATGTTCCTCCAATGTCTCAGTCAAGCGTTTCTGCTACTATCCCAGTTTCCAAACCATCAAAGAGTATTTCAGGCGTTGCGTGGCAGAAAAAATGCAAGAAATGTAGCTCTGTTAATAGCAGGACTTGCACAAAGGTGCTTAAGCGTGGAAGTGCACTTGGTAGATCAATTGACCTCTCGCGTATTACTGGATACAAAGACCTCATTTCTCAACTGGACTTGATGTTTGATTTCAAAGGAAGCTTAATAAATGGAAGCAACGGATGGCATGTTGTCCCCATGGATGACGACGGGGATATGATGCTGTTTGGAGATTTCCCCTGGCAGGATTTCCAGTCCATGGTGCAAAAGATGATCATTTGTCCAAAGGAGGACTCCAACAACCGGAGTGCTATTGGTAGCACAGCAGACTCAACAACCTTGTAA 2271 0.4659 MKESYRRYCNSNCITQYEEREKRAPPAGVVMVVRIVEGREEEESETGCHLLPLRHQRRMNGVAAANKGSSANNSPNNRDGAPTFNYGDLSLEGEKDVLNDSLWKACAGASVIVPRTGDLVFYFPQGHLEQVAEFTRQDGHMELPACDLPSKILCRVMGVQLKAEANTDEVFAQITLIPESKLDEVSSDDKGSRLKPRTTSKCFSKTLTLSDTGAHGGFSIPKKLAEECFPPLDMSQQPPGQELIAKDLHGNKWKFRHTYRGQPKRHLLTGGWSSFLHSKKLEPGDTCIFLCGEKGEIGIGIRRALKQHNKASSSTCVISGHSMQLGILATASYAVATGSMFTVYYRPWTCPSEFIVPLGHYMKPNKAKYSCGMKIQMQFEVEESTRRYAGTIIGIDDIDGMKWPASEWRCLKVKWDAKLDIDLRPERVCPWNIEPLESSGKNIPNLAPPKRPRLLGPSMSGLFDLTKDDIDLNSANNASQRCERDLQGQDYKDVGFQQYDSQFRTKNKPHFQLQIPPCHSLGGSASFPEDDISTSSPHKQPPIPTTYDACHNVPVTKYLSLSNVNSNDSESQGWRASGSRDENDSKTEYKLFGISLNHPELPSPQVAASSSTSTLHVPPMSQSSVSATIPVSKPSKSISGVAWQKKCKKCSSVNSRTCTKVLKRGSALGRSIDLSRITGYKDLISQLDLMFDFKGSLINGSNGWHVVPMDDDGDMMLFGDFPWQDFQSMVQKMIICPKEDSNNRSAIGSTADSTTL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1394 756 Gene3D - 368 442 - -
Lele06g1394 756 MobiDBLite consensus disorder prediction 563 584 - -
Lele06g1394 756 SUPERFAMILY CAD & PB1 domains 656 732 - -
Lele06g1394 756 Pfam AUX/IAA family 648 736 IPR033389 -
Lele06g1394 756 MobiDBLite consensus disorder prediction 63 83 - -
Lele06g1394 756 Gene3D - 201 305 IPR015300 -
Lele06g1394 756 MobiDBLite consensus disorder prediction 602 633 - -
Lele06g1394 756 MobiDBLite consensus disorder prediction 62 84 - -
Lele06g1394 756 CDD B3_DNA 201 303 IPR003340 GO:0003677
Lele06g1394 756 FunFam Auxin response factor 201 305 - -
Lele06g1394 756 Pfam B3 DNA binding domain 203 303 IPR003340 GO:0003677
Lele06g1394 756 Pfam Auxin response factor 331 412 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele06g1394 756 ProSiteProfiles B3 DNA-binding domain profile. 203 305 IPR003340 GO:0003677
Lele06g1394 756 ProSiteProfiles PB1 domain profile. 656 738 IPR000270 GO:0005515
Lele06g1394 756 Gene3D - 651 745 - -
Lele06g1394 756 MobiDBLite consensus disorder prediction 527 542 - -
Lele06g1394 756 SMART B3_2 203 305 IPR003340 GO:0003677
Lele06g1394 756 SUPERFAMILY DNA-binding pseudobarrel domain 198 331 IPR015300 -
Lele06g1394 756 FunFam Auxin response factor 368 440 - -
Lele06g1394 756 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 96 742 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele06g1394 756 MobiDBLite consensus disorder prediction 512 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1394 Lele-ChrLele06 8969254 8975192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1394 96 740 B3 DNA Binding Superfamily AT4G23980 39.458 2.27e-136 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele06g1394 AUX_IAA 2.9e-06 CL0072