Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1387 ATGAGGTCCACATTATTCTTGCTAGCTTGTGCGTTAATTTTTGCTTCTCTTGATGTTGGACAAGGAGGCGAACTAAGGAAGAACTTCTACCGAAGAACCTCTTGCCCTAAAGCTGAGGACATCATTAAAACTAGAATCACGCAGCTCGTCTCTTCTAATTCCGCTTTGCCAGCCCAGTTGCTCAGAATGCACTTCCATGACTGCTTTGTTAGGGGCTGTGATGCATCAGTGCTGCTGAACTCAACTGCTAATAATACAGCAGAAAAGGACTCAATCCCAAATCAAACTTTGAAAGGCTTTGAAGCCATCGATGCCATAAAAGCAACCGTCGAGGCCCAATGCCCAGGTGTTGTTTCCTGCGCCGACATCCTGGCATTGGCAGCTAGGGACGCCGTCTCCATCCCGTTTAAGAAACCTCTATGGGAAGTGCTTACTGGTAGAAGAGATGGGAGAGTATCGATAAGCCAAGAAGCATTGTTCAACATTCCGGCACCGTTCTTCAACTTCACTCAGCTCAGAGCCAACTTCGCCAAAAAAGGCCTGACGTTGCACGAGTTGGTGGTGTTGTCAGGCTCACACACCATCGGAGTAGCACACTGCAACTCCTTCAGCAACAGGCTCTTCAACTTCACCGGAAAAGGAGACCAAGACCCTTCTCTGGACCCCAAATACGCCGAGTTCCTCAAGTCCAAATGCAAGGGCCTCAGTGACAACACCACCATCGTGGCAATGGATCCCAACAGCTTTAACAAATTTGACTCTAGCTATTACTCCATCCTTCTTCAGAACAAGGGATTGTTCGAATCTGATGCTGCACTTCTCACCAACACGCAGGCCAAAAAGACTGTCCATGAATTGGTTGACCAAGAGGCTTTCTTCACTGAGTTCGCTCAGGCCATGAAGAGGCTCGGAAACATTGAGGTCCTCACCGGCACCAGTGGAGAAATTAGGAACAAGTGTTGGGACATCATCAAAACAAGAACCTCACAGCTCGTCTCTTCTAATCCTGCTTTGCCCGCCCAGTTGCTTAGAAGGCACTTTCATGACTGCTTTGTTAGAGGTTGTGATGCATCAGTGCTGTTGAATTCAACTGCTAATAATACTGCAGAAAGGGACTCAATCCCAAATCAAACTTTGAAAGGCTTTGAAGCCATCGATGCCATAAAAGCAACCGTCGAGGCTCAATGCCCCAGGGTCGTTTCCTGCGCTGATATCCTCGCTTTGGCCGCTAGGGACGCCGTGTCCATCCCGTTTAAGAATCCTCTATGGGAAGTTCTTACCGGTAGAAGAGATGGGAAAGTATCCATAAGCCAAGAAGCATTATTCAACATTCCGGGTCACACACCATTGGAATATCACACTGCCAACTCCTTCAGCTGCAGGCTCTTCAACTTCACCGGAAAAGTTGACCAAGATCCTTCTCTGGACCCCACCTACACAAAGTTCCTCAAGTCCAAATGCAAGGGCATCGGTGACAGCACCACCATCGTGCCAATGGATCCCGACAGCTTTAAAACATTTGACTCTCACTATTACTCCAACCTTGTCCAGAACAAGGGACTGTTCCAGTCTGATGCTGCGCTTTTGACCGACAAGCAGGCCAAGACTGTGAGTGAACTGATTTACCAAACGGGTTTCCTCGCTGCGTTTGCGCAGGCCATGAATAGGCTCGGAAACATTGATTCCTTAAAATGCTAG 1698 0.4817 MRSTLFLLACALIFASLDVGQGGELRKNFYRRTSCPKAEDIIKTRITQLVSSNSALPAQLLRMHFHDCFVRGCDASVLLNSTANNTAEKDSIPNQTLKGFEAIDAIKATVEAQCPGVVSCADILALAARDAVSIPFKKPLWEVLTGRRDGRVSISQEALFNIPAPFFNFTQLRANFAKKGLTLHELVVLSGSHTIGVAHCNSFSNRLFNFTGKGDQDPSLDPKYAEFLKSKCKGLSDNTTIVAMDPNSFNKFDSSYYSILLQNKGLFESDAALLTNTQAKKTVHELVDQEAFFTEFAQAMKRLGNIEVLTGTSGEIRNKCWDIIKTRTSQLVSSNPALPAQLLRRHFHDCFVRGCDASVLLNSTANNTAERDSIPNQTLKGFEAIDAIKATVEAQCPRVVSCADILALAARDAVSIPFKNPLWEVLTGRRDGKVSISQEALFNIPGHTPLEYHTANSFSCRLFNFTGKVDQDPSLDPTYTKFLKSKCKGIGDSTTIVPMDPDSFKTFDSHYYSNLVQNKGLFQSDAALLTDKQAKTVSELIYQTGFLAAFAQAMNRLGNIDSLKC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1387 565 Gene3D Peroxidase, domain 2 163 303 - -
Lele06g1387 565 CDD secretory_peroxidase 322 563 IPR033905 GO:0004601|GO:0042744
Lele06g1387 565 SUPERFAMILY Heme-dependent peroxidases 30 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PANTHER PEROXIDASE 25-RELATED 455 563 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 Gene3D - 28 319 - -
Lele06g1387 565 ProSiteProfiles Plant heme peroxidase family profile. 322 565 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lele06g1387 565 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 FunFam Peroxidase 28 167 - -
Lele06g1387 565 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 FunFam Peroxidase 163 303 - -
Lele06g1387 565 Pfam Peroxidase 327 447 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 SUPERFAMILY Heme-dependent peroxidases 319 562 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele06g1387 565 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
Lele06g1387 565 Gene3D - 320 460 - -
Lele06g1387 565 FunFam Peroxidase 353 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1387 Lele-ChrLele06 8926748 8931489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1387 323 561 Peroxidase AT1G05260 46.494 7.35e-69 223