Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1374 ATGACTATCTTCTCTCTTCATCATCTCAAGTTAAAGCTCTTATCTTTTTCCCTCACTCTCTTCCCCTCACCATTATTCTCTGGTTCTCCTCTTCCTTCTCACTCTCGCCCCCTTCAACCCTCTTCCTCAATGTCCCTCTCCCTCTTCTTCTTCTTCTTCTCTGTTTCCCTCGCTTTCCCACTTTCTTCCCTCTCTGCAAACGACACCGCTCTTAATGCTCCCTGCCCTCTCAACTTCACCGTCCTCAATGTTGTTGCCGGCGGTGACAAACCCTCTGTTGACTCCGGCACTGTCTGCGGGTTCTCCCGTTCCGCCATTCGTCTTGTTCAGTCCGATTACCTTCGTCGCACTGGCTTCTTCCTTCCCCCTATCAACTCATCCGAGACCTGCTGGGATAATTTCCAGAAGTTCATCAATCAATACCTTCCCAACATCGACGTTCGCACCACTTGTGGCTTCCAAACAACCTGGATCTCCCAGGGATGCCAGAACATCACCACTAAAGATGATTTCGAGTCCCAGGTTCCTCCCTCGGTTATTCAGGGTGTCGGTCGGAATTGCAATCAGTCGCTCGAAAATAACTCCCCCTGCGCCCTCTGTACCTCGAGCTTACCGAATATGCAAGCGTACGTGAAAGGGAATTCGACCGGGAACGTCTCCGACTGTACGGCCTATCCCCCAATTTACGCCGCCGCCTTTTCCAATCAGGCTGGGCCCACCGACAGAGGCACTGCCCAGTGCGTGTTCCTTCTCAGCTTCAAGTGGCCAGGTTCCAACGGTAATAAACGAACGATTGTTATTGTGGCGGTTGTGATTGTCTGTGTATTTGCTTTGTTGCTGGTGATTGTCGGGCTTTGGCTTCACCGGAGATCGAAACAGAAAGGCAAGAAGGGTATTAGCAAAACTGAGATTCATGTCGTGTCTGGGTTGGATTCAATGAAGGAGAGCACCACTTTGATTAGGTTTACATTCGATGATATCAAGAAGGCAACGAGGAACTTCTCTAGGGATAACATAATAGGTAGAGGGGGATATGGAAATGTGTATAAAGGGTTACTCCCAGATGGAACTGAAGTTGCATTGAAAAGGTTCAAGAATTGTTCTGCTTCAGGAGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCGAGCGTCAGGCATGTACATTTAGTTGCTCTGAGAGGTTATTGTACAGCCACAACTAATTTAGAGGGTCACCAGAGGATAATCGTTTGTGATTTGGTCAAGAATGGGAGTCTTCATGATCATTTATTTGATTCTTCAGGAAAGAAACTCAGCTGGCCAATTCGTCAACAGATTGCACTGGGCACTGCAAGAGGATTGGCTTATTTACACTATGGGGCTCAACCTTCCATTATCCATAGGGATATTAAAGCAAGTAATATTCTTCTGGATGAGAAGTTTGAAGCTAAAGTTGCAGATTTCGGACTCGCCAAGTTCAACCCCGAGGGAATGACTCATATGAGCACGCGTGTAGCTGGAACAATGGGATATGTTGCACCAGAGTATGCATTGTATGGACAGTTAACAGCGAGAAGTGATGTGTTCAGTTATGGTGTCGTGCTTCTCGAGCTTTTGAGCGGGAAGAAGGCTCTTCAAATGAACGACGATGGCCAACCCTCATCTTTGAGTGACTTGGCCTGGTCATTGATTAGGTCAGGTAGAGCTTTGGATGTCATTGAAGATGGTATGCCGGACGCCGGTTCGCCGGAAGTGCTCGAGAAGTACGTGTTGATAGCTGTTCTTTGTTCTCATCCTCAGTTGTATGCAAGGCCAACAATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTACCATCAATACCAGAACGGCCAATTCCTCTAGTCGCCGGAAGGATTGATATCGAGAGATCTGCCGGTAGCTTTGGCGGCTCCGGTCAGCTCTCCAGTCCAACAGGTTATCGAACATTCGCATATGAAAGTGAATACCATTCTTCTAATTCAAAGGAAGAAGAAGGAAGTTCAGACTCAAGAACACTGAGTACATAA 2037 0.4742 MTIFSLHHLKLKLLSFSLTLFPSPLFSGSPLPSHSRPLQPSSSMSLSLFFFFFSVSLAFPLSSLSANDTALNAPCPLNFTVLNVVAGGDKPSVDSGTVCGFSRSAIRLVQSDYLRRTGFFLPPINSSETCWDNFQKFINQYLPNIDVRTTCGFQTTWISQGCQNITTKDDFESQVPPSVIQGVGRNCNQSLENNSPCALCTSSLPNMQAYVKGNSTGNVSDCTAYPPIYAAAFSNQAGPTDRGTAQCVFLLSFKWPGSNGNKRTIVIVAVVIVCVFALLLVIVGLWLHRRSKQKGKKGISKTEIHVVSGLDSMKESTTLIRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVHLVALRGYCTATTNLEGHQRIIVCDLVKNGSLHDHLFDSSGKKLSWPIRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTARSDVFSYGVVLLELLSGKKALQMNDDGQPSSLSDLAWSLIRSGRALDVIEDGMPDAGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVAGRIDIERSAGSFGGSGQLSSPTGYRTFAYESEYHSSNSKEEEGSSDSRTLST 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1374 678 Pfam SPARK 72 222 IPR043891 -
Lele06g1374 678 SUPERFAMILY Protein kinase-like (PK-like) 311 609 IPR011009 -
Lele06g1374 678 Gene3D Phosphorylase Kinase; domain 1 295 413 - -
Lele06g1374 678 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 415 616 - -
Lele06g1374 678 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Lele06g1374 678 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 295 413 - -
Lele06g1374 678 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Lele06g1374 678 Pfam Protein kinase domain 335 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1374 678 SMART serkin_6 334 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1374 678 MobiDBLite consensus disorder prediction 657 678 - -
Lele06g1374 678 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 199 675 - -
Lele06g1374 678 CDD STKc_IRAK 340 609 - -
Lele06g1374 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Lele06g1374 678 ProSiteProfiles Protein kinase domain profile. 334 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1374 Lele-ChrLele06 8846899 8848935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1374 59 664 Receptor kinase-like Gene Family AT2G48010 63.054 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lele06g1374 Pkinase 8.8e-42 CL0016