Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1366 ATGGACACTCAAGCAGACCATCTTGAAACGCCAACGCCGGCCAAAAGGCACAAGTGCTCAGCATGCTATAAGCAATATAAGAAAAAGGAACATCTCATTGAGCACATGAAAATCTCAAACCACTCAGTCCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAGTCTCTGAGGGAACACCTTACTGGTCCATTGCCGAAAGGAAATTGTTCCAAGCACTTCTCTCAACATGGTTGTCAACTTTGCTTAAAATTATTTGATAGCCCCACATCTCTTATCGATCATAAAGCGATATGTTATCTATCTGCGCCCACTCCTCTGGGAACAGATACATTGACCTATGTGAGATCCCCAATGCATCGTCCAGATTCTTCTGTTGAAAGCCACACTGGAAGGAACCCTGGGGCAATTGGAATTGATTGCGAAATGGTTGGTGGTGGGAGTGATGGAACATTAGATCTTTGTGCTAGAGTGTGCATGGTTGATGAAGATGAGAATTTAATTTTCCACACCTATGTGCAGCCCCAAATCCCAGTTACTAACTATAGATATGATATAACTGGGTTGACAGAAGAGCATCTTAGAGATGCCATGACACTTAAGGAAGTTCAAGAGAAGGTATTGCAAATTCTGTACAATGGAGAATCAATTGGCAAAGTTAGATTGGATGGAGGAAAGGCCAATCTTCTTGTGGGGCATGACCTAGAACATGATTTGGACTGCCTGAAATTGAATTATCCTGATCATATGTTGAGGGACACCGCAAAGTATCGTCCGTTGATGAAAACAAACTTGGTCAGCCATTCGCTTAAGTACCTTACTCGAACATATTTAGGCTATGACATCCAGACAGGCGCACATGACCCTTATGAAGACTGTGTTTCCGTGATGAGGCTGTACAAGAGAATTCGAGGCCAAATTCATACGGAGGAAAACGTCGGAACATTTACTGCAAGTAACGTCACCGGAATTTCTGATTATTGGAAATCCAAGGAAGCTGAGAACTCAACACCAGATGAACTCTTTGCCAAGTCAAAGTCAGACTATAAGTGCTGGTGTTTGGATTCAGTGTAG 1086 0.4282 MDTQADHLETPTPAKRHKCSACYKQYKKKEHLIEHMKISNHSVHQPKCGVCQKHCKSFESLREHLTGPLPKGNCSKHFSQHGCQLCLKLFDSPTSLIDHKAICYLSAPTPLGTDTLTYVRSPMHRPDSSVESHTGRNPGAIGIDCEMVGGGSDGTLDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAMTLKEVQEKVLQILYNGESIGKVRLDGGKANLLVGHDLEHDLDCLKLNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQTGAHDPYEDCVSVMRLYKRIRGQIHTEENVGTFTASNVTGISDYWKSKEAENSTPDELFAKSKSDYKCWCLDSV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1366 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 17 46 IPR013087 -
Lele06g1366 361 ProSitePatterns Zinc finger C2H2 type domain signature. 19 41 IPR013087 -
Lele06g1366 361 Gene3D - 137 321 IPR036397 GO:0003676
Lele06g1366 361 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 20 318 - -
Lele06g1366 361 CDD REX4_like 141 305 IPR037431 GO:0006364|GO:0008408
Lele06g1366 361 SMART exoiiiendus 139 313 IPR013520 -
Lele06g1366 361 Gene3D Classic Zinc Finger 1 67 - -
Lele06g1366 361 Pfam Exonuclease 141 304 IPR013520 -
Lele06g1366 361 SUPERFAMILY Ribonuclease H-like 141 308 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1366 Lele-ChrLele06 8783766 8786921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1366 16 361 C2H2 Transcription Factor Family AT3G27970 53.179 3.10e-137 393