Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1335 ATGACCACGATCCGCAGGTTTTGCTGTAACGATCTCCTCCGCTTTGCTTCCGTCAATCTCGACCACCTCACTGAAACTTTTAACATGTCATTCTACATGACCTACCTTGCAAGATGGCCGGACTATTTCCATGTTGCCGAAGGTCCTGGCAACCAAATCATGGGTTACATTATGGGGAAAGTGGAGGGGCAAGGAGAGTCCTGGCATGGTCATGTTACTGCAGTAACTGTTGCCCCAGAATATCGTCGGCAGCAGTTAGCCAAGAAACTGATGAATCTACTGGAAGACATAAGTGATAAGATTGACAAGGCTTACTTTGTCGATCTCTTTGTGAGAGCATCAAATGCACCTGCCATAAAGATGTATGAAAAGCTTGGCTATGTGATATATCGGCGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGATTAGATATGAGGAAGGCATTATCGCGTGATACTGAAAAGAAGTCTATCATCCCTCTTAAACGTCCGATTACTCCTGATGAATTAGAACATGTTAGAAGTCTGAGATGTCTTGTGTTGAGGAATGCGAAGGGGAAGGAAGGGTGGATTTCTACTGACATACCTCACCCTAAGATAGTCTGTGGGGTATATTTTTTGTTTGATCCACATTCCCCATTTCTTTCATTGGGGGAACTGGTTCTTCAGTTCTCATCGTTTCAGCTGCAGCCTCTCTTCTCTCATCATGATACAACCCATATGCCTCTCTCTCACTCACTGGATGCCGTGTCTCCTGTGACTGATTCTGAGGGCAGTGGGATTTCACGTTGA 795 0.4528 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNQIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDTEKKSIIPLKRPITPDELEHVRSLRCLVLRNAKGKEGWISTDIPHPKIVCGVYFLFDPHSPFLSLGELVLQFSSFQLQPLFSHHDTTHMPLSHSLDAVSPVTDSEGSGISR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1335 264 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Lele06g1335 264 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Lele06g1335 264 MobiDBLite consensus disorder prediction 245 264 - -
Lele06g1335 264 Gene3D - 2 165 - -
Lele06g1335 264 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Lele06g1335 264 CDD NAT_SF 45 97 - -
Lele06g1335 264 MobiDBLite consensus disorder prediction 250 264 - -
Lele06g1335 264 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Lele06g1335 264 FunFam N-alpha-acetyltransferase 20 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1335 Lele-ChrLele06 8539838 8544578 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele06g1335 Acetyltransf_1 4e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1335 06 8539838 8544578 Lele06g1335 06 8539838 8544578 ECH
Lele06g1335 06 8539838 8544578 Lele07g1539 07 9459570 9461892 hybridization
Lele06g1335 06 8539838 8544578 Lele08g1330 08 8480352 8486014 hybridization