Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1329 ATGTGGGAAAAAGTATTGAACGATGAAGCAGCACCAAGTCAACCATTGTCATCAAACTTCGTTTACAGATTCATTCTTGTCTGGTCATCACATTCACGTTCCTCCAAAAACTCGTCTTTCCTACTGTTACTGCGACTTCTCTTTCTCACCCTCCATAACTTCCCTACGCCACGCTTCGCCACGGGATCGTCTTTTGCGTCTCTCATCGTATGTGATCGTAGAATTTCCCGACTTTCCTACATTAAGTTTAATGGACGTCTTACGGGCGGGGCTCTCAGCGTGCGTCAACCGAGAGTCAATGATTGGGACAGGGAATTTGGAGTTAGGGGTGAGGGTTCGGCCCATGAAACAGAGGCATTAAACTTGACAATTCAGGACAATCGGGTAGAGCCTGTTGTACAACAAGAAAGGGTCTTTGATTGGGATTCCAATAACAATGAAAATATCATGTTAGCCAAAAATGGGAGCAAGATGAGTAGTTTAAGCTGTGATGATAACGTTGAAGGAGTTGACATTGTGATGGAGGTGAAGAAAAAGGATGATTTGAACGGTCGGGTGAAGGTTGGTGGTCGACTATTATCCTCAGTGTCCGAGGGAGCTGACAACAAGATATCTGATGATCGAGAGGCATTAAACTTGAAAGTTGATAATAAGGATGCGGAGCTAACTGTGCAACAAGAACGTGACTTAGATTGGGATATGGGTAAGGGTGGGAATGTGGGGTTTGTTGATGACAGGAGCAAAATGAGTAGTTTAAGCTGTGATGATAACATTGAAGGGTTTGACATTGAGGTGGAGGTGATGAAGAAAGATTATTTAAATGATAAAGTGCAGATTGGTGGTCGAGTATTGCGCTCAGCGTCAAAGAGAGCGGTCAGTAAAGTATCTGATGGAGAAACAACTGAGAATGAGGAAGTGAAGCCAATCAACCAACAACAATGTGACTTAGATTGGGACGTGAGCAAAAGTGGAAATGTTGGATTGGGTAAGACTAGGATCAAAAGGAATACTTTACGGTCTGATCCTTGCTTTGAAGGACTTGATATTGAAATGGAGTTGAAGAAGAAAAGTAATACAAATGATAAAGTGAAGACTAGCGGTCGAGTATTGCGCTCAATGTCAAAGAGAGTAGACAGTGAGATATTTCATGGTGGAGAAGCTGATGACGTGTTGGTTGGGAAAAATGGAGAGAATGGACATGTTTGGTTTGAGAAAAATAAGGTTAAGGTGGAAAAGGAAGAAGGGGATGATTTTGTTGGTAGCAGTTATGAGAAGGAGGGAGTTGATGTGAAAAAGGATGGCAATGAAAGAAGGAAGTTGAAACGAAAGCGTGGCAGGCCCCCTAAATTGAAGATGGAAGAGCAAGATCAAGCAGTTGGTAATAGGCAACAGAAATGTGGCAGTCCTCCCAAATTGAAGATAGAAGAGCAAAGTCAAGTTGATGGTAAAATGCAACGGAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTGATATGCAACAGAAGCGTGGAAGGCCCTTCAAAGTGAAGATAGAAGTGCGAGATCAACTAGCTGGTACTATGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGTGCGAGATCAACTAGTTGGTAATGTGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGTGCGAGATCATCTATCTGGTAATATGCAGCGTAAGCGTGGAAGGCCCTTTAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTAATATGCAACGTAAGCGTGGAAGGCCCCCCAAAATGAAGATGGAAGAGCAAGATCAACTAGTGGGTAATATGCAATGTAACCGTGGAAGGCCCCGCAAAATGAAGATGGAAGAGCAAGATCAACTTCCTGGCAAAAAAATGCCATGGAAGTGTGGAAAGCCTCCCAAAAGTGGGCAGAAAATTAATCAACTGGAAATAGCGCGAAACAGAAAAAGAAGGGCGGGCTTTCAGAAAGTTAAGAAAAGTATAGCGGTGAGAGACAATACAAATACAATTGCAGTTGATGATATGTGCTTGAAAAAGGGATCTTGTGTAACAGAATCAAAACAGAAGAGATTTTTTCCTGTTAAGAAGAATGAATTTGGGAGCTTTTCAGAAACCGAGAATAGTGCATTGACTATACCATTAATATCAAATTCTGCAAATCCTCTCATTAAGAAGAAAAAAGGAATGAGGAAAGCGAAGCAGTTGGCGAGGCAACACATTTGGGAGCTACTTTCAGCTGCGGGCTGGATTGTTGATTACAGACCTAGGAATGGCAAAGAGTGTAATGATGCAGTGTATGTTAGTCCAGATGGAAAGACTCACTGGTCAATTACCTTGGCTTACAAAAGGCTTCGGATGCATTCTGAAACTGGTGATGGTGAAGGTGACGTATACATTCCAGGTTTCAAATTTGTGCCCATACCATTGGAGGAATTCAATATTCTAACTAGGGTCATTAAAAAGAGAAGGAAAGATAAAGGTAAATTGAAGCAAACAGGAGGAAAAGATGGAGATTCAATTAATGGAATCAAAAGAAAAATGAAGGGGAAAGTTAAGAGAAAAATGTCACTTGTTGAGGAGGACAATTTAGACAATACATCACATAAAAGGTTTCCTGTTCTGGTCAAGGATCGGAAACGGCAGAAAACACATAATAAGAAGCGAAGTGTTTTTATGGTTCGCAATGCTGAGGAGATGGACTCAAAAACTAATGGGTATGTACTTTACACTGGAAAGCGAACTGTGCTTGCCTGGATGATTGATTTGGGAACAATCATGCAAAATGAGAGGGTTCACCATTGGAACCACGGAAGGAAAGGCGCAAAATTGGAGGGTAGGATCACAAGAGATGGAATTCATTGTGACTGCTGCAATGAAATTGTAACAGTGTCAGAATTTGAAGCCCATGCAGGAAGCAGACTCTCTGATCCACTCAAAAATATACATATAGAGAGAGGAATTTCCCTTCTGCAATGCCTGCTAGACTCATGGAATAAACAAGATGAACATGAAAGAAAAGGCTTCCATTTTATTGACACTACAAGCGAAGACCCCAATGATGAAGCATGCGGTGTCTGTGGTGATGGTGGAGACTTGATCTGTTGTGATAATTGCCCATCAACATTCCATCAAAGCTGCCTAAATATCAAAGATCAGTTTGTTTTGACAGCTGTATATTTCATCACCTATGCCTTGCCAATGGCCATCCATCGTTACTCTGCCTTGCAAATTGTTTGTGTTCGTAGGAGTTCCCACCTGGCAACTGGCGATGCATTTATTGTTGTTGCAAATTTTGTGAGTTGGTTGACGGAAGTACAAATGACAGAGATGGCTATGATGACTTTACTACCTCTGCTTTACTTACGTGCCGATTATGCAATCAAAAATGTAAATGGAGTCCCAGCTGATGACTCTAGTTTCTCTTTCTATTGTGGACACAGATGTGAGGAGTTATCCAAGAGACTAGAAATGCTTCTCGGGGTTAAACATGACATTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTCAGATGTTGGCTATGATGCTTCTCAAATAGAATCTCAGATGGTTGAATGCAATTCCAAGCTAGCTGTCGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGATTAATCTCATCCACAGTATTCTTTATAATTGTGGTTCAAACTTCAATCGCCTGAACTATATTGGCTTTATTACTGCTATCCTGGAGAGAGGTGATGAGGTCATTGGCGCAGCATCTATTCGGATTAGAGGGAACCAACTAGCAGAAATGCCATTCATTGGGACCCGCTATATGTATAGGCGCCAAGGAATGTGCCGCCGGCTTCTGAGTGCTATTGAATTGGCACTTAGCTCTTTAAATGTTGAGTTATTGGTCATACCAGCAGTCTCAGAAGTCCGAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGTGACAAGGAAGCAAATGATAAAGAATTTCAATTTGCTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTGAAGTTGCTGATGAAGATCTAATTCCTATAGAATTTTCAAATCCTAAACTACAGAAGAATCTAAGTACACTTGAGGAAGCAACTGACGGTGATGAACCAAGTTCATTTCGGTCTGATTTGATCATTTCTGATGGGAGTGGGATACCTGCGTTAGATATATGCCCAGTGAATGATAGATACGTGTCTGTTGAATCTGGTTCTCCTGATGCCTTGTTGAATAACCCACATGACATTACTAGCAAGACTGTACATCCTGATACAAGTCCAAAAGATGCAAAATGTGAATTTGGGGTCCATGCTGTCAATGATAATTTGACAGTGGAAGGCATGACTGATGTAAAGGCACATGATTATGTTAGCGCTGCTCATTTGCAAGCTGAAGAGATAGTCAATCATGATTGTGTTCAATCGAGAGAAATAGATTCTGAATCTATCAATGGCTGCGGTTCTCAGCGGAGACCCAATGGTTATTGTGCCCAAGATGAAGTGAATCTCGAGACCACTGAAGTTGATAAATCAGACGTGCGTGTTGCAGAAGCAACCAATCTCCATAGTATCGTACATCCTGGAGATTCCCAATCAATACAGATTGCTTCAGGTTCCTGCGAGGATATCACAAACGGTGTAAATGAGAGGAATGAAGCAGCCATTACGGCTGATGGGAACTCAGATGTTCGTGATAAGCCTGGCATAAATCGGTATTCAGAGCCGCCTGAGCCTGATTTACAGGTCAATCAAACTGGACAGGGTGACGCTCCATCCTCGTGTGGTTCCGGCATGGCTCTTCACTGTGCATCAGCCGAAGGTATAGTTCTGTCCAACGAAGCCAGTTGA 4929 0.422 MWEKVLNDEAAPSQPLSSNFVYRFILVWSSHSRSSKNSSFLLLLRLLFLTLHNFPTPRFATGSSFASLIVCDRRISRLSYIKFNGRLTGGALSVRQPRVNDWDREFGVRGEGSAHETEALNLTIQDNRVEPVVQQERVFDWDSNNNENIMLAKNGSKMSSLSCDDNVEGVDIVMEVKKKDDLNGRVKVGGRLLSSVSEGADNKISDDREALNLKVDNKDAELTVQQERDLDWDMGKGGNVGFVDDRSKMSSLSCDDNIEGFDIEVEVMKKDYLNDKVQIGGRVLRSASKRAVSKVSDGETTENEEVKPINQQQCDLDWDVSKSGNVGLGKTRIKRNTLRSDPCFEGLDIEMELKKKSNTNDKVKTSGRVLRSMSKRVDSEIFHGGEADDVLVGKNGENGHVWFEKNKVKVEKEEGDDFVGSSYEKEGVDVKKDGNERRKLKRKRGRPPKLKMEEQDQAVGNRQQKCGSPPKLKIEEQSQVDGKMQRKRGRPPKVKMEEQDQLVGDMQQKRGRPFKVKIEVRDQLAGTMQRKRGRPFKVKMEVRDQLVGNVQRKRGRPFKVKMEVRDHLSGNMQRKRGRPFKVKMEEQDQLVGNMQRKRGRPPKMKMEEQDQLVGNMQCNRGRPRKMKMEEQDQLPGKKMPWKCGKPPKSGQKINQLEIARNRKRRAGFQKVKKSIAVRDNTNTIAVDDMCLKKGSCVTESKQKRFFPVKKNEFGSFSETENSALTIPLISNSANPLIKKKKGMRKAKQLARQHIWELLSAAGWIVDYRPRNGKECNDAVYVSPDGKTHWSITLAYKRLRMHSETGDGEGDVYIPGFKFVPIPLEEFNILTRVIKKRRKDKGKLKQTGGKDGDSINGIKRKMKGKVKRKMSLVEEDNLDNTSHKRFPVLVKDRKRQKTHNKKRSVFMVRNAEEMDSKTNGYVLYTGKRTVLAWMIDLGTIMQNERVHHWNHGRKGAKLEGRITRDGIHCDCCNEIVTVSEFEAHAGSRLSDPLKNIHIERGISLLQCLLDSWNKQDEHERKGFHFIDTTSEDPNDEACGVCGDGGDLICCDNCPSTFHQSCLNIKDQFVLTAVYFITYALPMAIHRYSALQIVCVRRSSHLATGDAFIVVANFVSWLTEVQMTEMAMMTLLPLLYLRADYAIKNVNGVPADDSSFSFYCGHRCEELSKRLEMLLGVKHDIEDGLSWTFIRRSDVGYDASQIESQMVECNSKLAVALSVMDECFMPYIDHRSGINLIHSILYNCGSNFNRLNYIGFITAILERGDEVIGAASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLSAIELALSSLNVELLVIPAVSEVRDTWTSVFGFEPLEVTRKQMIKNFNLLVFPHVDMLMKEIKKPEVADEDLIPIEFSNPKLQKNLSTLEEATDGDEPSSFRSDLIISDGSGIPALDICPVNDRYVSVESGSPDALLNNPHDITSKTVHPDTSPKDAKCEFGVHAVNDNLTVEGMTDVKAHDYVSAAHLQAEEIVNHDCVQSREIDSESINGCGSQRRPNGYCAQDEVNLETTEVDKSDVRVAEATNLHSIVHPGDSQSIQIASGSCEDITNGVNERNEAAITADGNSDVRDKPGINRYSEPPEPDLQVNQTGQGDAPSSCGSGMALHCASAEGIVLSNEAS 1642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1329 1642 CDD NAT_SF 1258 1317 - -
Lele06g1329 1642 PANTHER PHD FINGER PROTEIN 12 1153 1516 IPR042163 GO:0003714|GO:0045892
Lele06g1329 1642 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1255 1346 IPR016181 -
Lele06g1329 1642 Pfam Tify domain binding domain 959 1008 IPR032308 -
Lele06g1329 1642 MobiDBLite consensus disorder prediction 476 501 - -
Lele06g1329 1642 SMART AT_hook_2 617 629 IPR017956 GO:0003677
Lele06g1329 1642 SMART AT_hook_2 485 497 IPR017956 GO:0003677
Lele06g1329 1642 SMART AT_hook_2 595 607 IPR017956 GO:0003677
Lele06g1329 1642 SMART AT_hook_2 441 453 IPR017956 GO:0003677
Lele06g1329 1642 SMART AT_hook_2 551 563 IPR017956 GO:0003677
Lele06g1329 1642 SMART AT_hook_2 529 541 IPR017956 GO:0003677
Lele06g1329 1642 SMART AT_hook_2 573 585 IPR017956 GO:0003677
Lele06g1329 1642 MobiDBLite consensus disorder prediction 426 501 - -
Lele06g1329 1642 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1202 1362 IPR000182 GO:0016747
Lele06g1329 1642 SUPERFAMILY FYVE/PHD zinc finger 1028 1066 IPR011011 -
Lele06g1329 1642 MobiDBLite consensus disorder prediction 623 651 - -
Lele06g1329 1642 MobiDBLite consensus disorder prediction 1585 1623 - -
Lele06g1329 1642 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1025 1097 IPR013083 -
Lele06g1329 1642 PRINTS AT-hook-like domain signature 441 451 IPR017956 GO:0003677
Lele06g1329 1642 PRINTS AT-hook-like domain signature 593 603 IPR017956 GO:0003677
Lele06g1329 1642 PRINTS AT-hook-like domain signature 483 494 IPR017956 GO:0003677
Lele06g1329 1642 SMART PHD_3 1036 1094 IPR001965 -
Lele06g1329 1642 MobiDBLite consensus disorder prediction 1604 1619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1329 Lele-ChrLele06 8503420 8514239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1329 483 1369 PHD Transcription Factor Family AT5G36670 36.052 1.36e-159 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1999 13 27345881 27347497 Lele06g1329 06 8503420 8514239 CCT
Lele14g1931 14 25672658 25673497 Lele06g1329 06 8503420 8514239 CCT
Lele15g0407 15 2337441 2338622 Lele06g1329 06 8503420 8514239 CCT
Lele16g0432 16 2323134 2323862 Lele06g1329 06 8503420 8514239 CCT
Lele06g1329 06 8503420 8514239 Lele06g1329 06 8503420 8514239 ECH
Lele06g1329 06 8503420 8514239 Lele07g1533 07 9428130 9436394 hybridization
Lele06g1329 06 8503420 8514239 Lele08g1324 08 8438538 8448607 hybridization