Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1298 ATGGGGATGACTCTGCGTGCATCTATTGATTCCATGCATCGATCTGCCAAAGATATCACAACAACTCGAAAGAAACACTACGAATCTGGAAGGCACGTGAAGCGTAGAACTGCAATTTTACTGAGCACTGAGCGGTCGCAGCTGCCTCTGGCCACAGATTTTATAGCTTTATTGCTGTCAGCATCCTTTGAGTTAGGTAATATGAGTCAGAAAAAGAACCCTCTTGTGTTTCTAGACGTTTCAATTGATGGGGATCCTGTGGAAAGAATTGTTATTGAGCTTTTTGCCAGTATCGTTCCTAAGACAGCTGAAAATTTTCGGGCACTCTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGAAAGCCTCTGCATTATAGAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTGTATATGGAGGAAAGTTCGCTGATGAAAATTTCATATTAAAGCATGACGGACCTGGTCTTCTATCTATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATATTGTTTTTGGAAAAATTGTTAGTGGATTAGATCTTCTGAAGAAAATTGAACTTGTGGGGACACCAGAAGGGAAACCTGCCCAACCTGTTAAAATAATTAATTGTGGAGAAACGACTGAAGCGAAAATTCAGCCAAAAATTGAGAAAGAGAAAGGTAAAAAGAGAAAATCTGGGGAATCATCAATTTCTTATGATAGTTCTGACCAAAAATCAAAAGGAAAAAGGAAAACATCTTCCAAGGATCTGAGGAAGAGGAGATACTCAACGTCTGATTCATACAGCTCTGATAGTGATAGTGACTCTGTTTCTTCTGACTCAGATTCTGGGTCAGAATCATCACTTTCTGATTCAAGTTCCTCTAACTATGGTAAACATCGAAAGAGGAAACCTGTGAAAAGATCTAGGCGCAAGCAGGGGAAGAAAAGAAGAAATGGAGGAAAGCAAAAGAGTAGCGGGCATAATAGGCGTTCTAGACGCAAGTCCAAATGGAGCTCAGAAGATTCAAGTGATACTGAAAGTGATAGTACTAAAGGTAGTGACAGTTCTGATGCCGAGAAAGCTCACCACCGTGTCTCAGGTCGTAAAACACATGCTGACAACAAACAAAAAAGAAATTTAGAATCAGGAAAGCAATCTCCCAGCCCTCCTTTAGTTGGAACTGCTCCAGATCAAGGGGAAGATTCCAAGGTCAAAAGAACTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCCGAGTGTCTGATTAATGGGCATGATGGTGAAGCCAAATTCAGTAAACCTGCTAAGCAACCCACTCATTTGGATGATTCTAATGACAATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAGTCCCACTAGGAAGGTAGTTGAGCAAAACCAAGGAGGTGCTTTGTTGACGAGTACCCGCCAACCTGCTGCCTCCAAACACGGTCAGGGTTTATCAAAAAGCCCTTCACCAAATGGTGAACCAAAGCGTATTAGAAAAGGACGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGCCACCCCATTCCTATCGCCATGGTGATAGAAATATAAGAAGGAACTTTGACAGGCGTACAAGCTACAGAAACTACTCTGAGCGTTCACCACAGAGACGCCGCTATGGAAGCCCTCCGATGCGCAGGAGCGGTCCAAGATACCGAAGCAGAAGAAACCGGAGTAGGAGCATCTCTCACAGTCCAGTGTGTGACCGTTTTAGGGACCGTGGTCACAGCCAGAGTCCAATACGTAGCCCCTCTCCAGGCGACAGGCGACCTCCAACAAGTGATAGATTAAAATCCCGACTTGGCCCTCAAAGTGTTCGGCACTCTCCAGACAGAGGAAGGGCCAGGTACAATTCCAGGGATCATTTGTCTCCCTCCAGATCCCCTGATGCTACCCCACCTAGGCGTCATGATAAAAGGACTTCTGCATCTCGAAGCAGGTCTAGATCTAGTTCGTCATCCGGACCGAAGGGATTAGTTTCCTATGGAGAGGCCAGTCCTGATTCCGGGTCAAGATAG 2184 0.4469 MGMTLRASIDSMHRSAKDITTTRKKHYESGRHVKRRTAILLSTERSQLPLATDFIALLLSASFELGNMSQKKNPLVFLDVSIDGDPVERIVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTCFHRIIKGFMAQGGDFSRGNGTGGESVYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHIVFGKIVSGLDLLKKIELVGTPEGKPAQPVKIINCGETTEAKIQPKIEKEKGKKRKSGESSISYDSSDQKSKGKRKTSSKDLRKRRYSTSDSYSSDSDSDSVSSDSDSGSESSLSDSSSSNYGKHRKRKPVKRSRRKQGKKRRNGGKQKSSGHNRRSRRKSKWSSEDSSDTESDSTKGSDSSDAEKAHHRVSGRKTHADNKQKRNLESGKQSPSPPLVGTAPDQGEDSKVKRTEDKQSHEEGELSPENSECLINGHDGEAKFSKPAKQPTHLDDSNDNRGASPRRSDAMSPTRKVVEQNQGGALLTSTRQPAASKHGQGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRPPHSYRHGDRNIRRNFDRRTSYRNYSERSPQRRRYGSPPMRRSGPRYRSRRNRSRSISHSPVCDRFRDRGHSQSPIRSPSPGDRRPPTSDRLKSRLGPQSVRHSPDRGRARYNSRDHLSPSRSPDATPPRRHDKRTSASRSRSRSSSSSGPKGLVSYGEASPDSGSR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1298 727 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 68 249 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 617 632 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 328 363 - -
Lele06g1298 727 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 202 217 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 201 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 143 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 87 240 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 MobiDBLite consensus disorder prediction 247 265 - -
Lele06g1298 727 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 76 241 - -
Lele06g1298 727 CDD cyclophilin_ABH_like 74 240 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 496 529 - -
Lele06g1298 727 SUPERFAMILY Cyclophilin-like 70 242 IPR029000 -
Lele06g1298 727 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 126 143 IPR020892 GO:0003755|GO:0006457
Lele06g1298 727 Gene3D - 64 248 IPR029000 -
Lele06g1298 727 MobiDBLite consensus disorder prediction 364 410 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 429 450 - -
Lele06g1298 727 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 241 IPR002130 GO:0000413|GO:0003755
Lele06g1298 727 MobiDBLite consensus disorder prediction 296 324 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 532 590 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 644 678 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 247 727 - -
Lele06g1298 727 MobiDBLite consensus disorder prediction 464 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1298 Lele-ChrLele06 8273279 8282363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1298 92 237 U-box Gene Family AT5G67530 47.973 2.48e-31 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1298 06 8273279 8282363 Lele06g1298 06 8273279 8282363 ECH
Lele06g1298 06 8273279 8282363 Lele07g1501 07 9160601 9165943 hybridization
Lele06g1298 06 8273279 8282363 Lele08g1295 08 8237133 8246935 hybridization