Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1292 ATGGCTGACTCTCACCTGAACCGCCAAGACGCCATGGATGTGGGAGACGCATATTCATGTGTTGAAGACCCCGCGGAGCCCCAAAAGTGGACCAAAATAGCTGATCAAGAAGTTGATCAACCCCTTCCAAGGATCGATATCTTCTTAAATTTCAATCATGGAGTCCAACCTGCAGGAAAGATAATACCTCCTCATGCTCAGACACTGATTGGTCGAATGATCTATAAGAAATGTGCTGGCAATTGTTACTTGGGAACCGTCGTCGACTATGATGTTGACAGACGCTGGTTTAGGGTGGAGTACGACGATGAGGGATCTGAAGACTTGGTGGAGGCAGAACTAGCAGCTGCTTGCAAAGGATCGAGGAAGAAGTGCTGTCTGAGTAGTGTTTCAAAATTTCATGGGTCGTCCATGCGATCTTCGGTTGTGTCCGTGTCTGTCTTTATTCTGTTCAGAACCATTTTCATCCCAATGGCCAACAGAGTTCAAATTCCTTCAAGAAATTCTGCGCTCATTGCAATGATTGCAGATGAGGACACTGTTGTTGGATTTTTGCTGGCTGGAGTGGGCAATGTTGACTTGCGCAGGAAGACAAACTACCTTATTGTGGACTCAAAAACCACTGTCAAACAAATAGAAGATGCATTCAAAGAGTTCACAACAAGGGAAGATATTGCAATTGTGCTGATTAGCCAATATGTAAGATATAATGCTCTTATATCGTGTGAAATTTTTGTTGCAAACATGATAAGGTTTTTAGTTGATAGCTACAACAAGCCTGTTCCTGCGATATTGGAGATTCCTTCTAAAGACCATCCTTATGATCCCGCGCATGATTCTGTTCTTTCGCGAGTGAAATATTTATTCTCTGCTGAATCTGTGGCATCTGGGAGACGTTAA 900 0.4344 MADSHLNRQDAMDVGDAYSCVEDPAEPQKWTKIADQEVDQPLPRIDIFLNFNHGVQPAGKIIPPHAQTLIGRMIYKKCAGNCYLGTVVDYDVDRRWFRVEYDDEGSEDLVEAELAAACKGSRKKCCLSSVSKFHGSSMRSSVVSVSVFILFRTIFIPMANRVQIPSRNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVRYNALISCEIFVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASGRR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1292 299 FunFam V-type proton ATPase subunit F 166 291 - -
Lele06g1292 299 SUPERFAMILY AtpF-like 172 286 IPR036906 GO:0034220
Lele06g1292 299 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 168 293 IPR005772 GO:0033180|GO:0046961|GO:1902600
Lele06g1292 299 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 135 295 - -
Lele06g1292 299 Gene3D ATPase, V1 complex, subunit F 166 291 IPR036906 GO:0034220
Lele06g1292 299 Pfam ATP synthase (F/14-kDa) subunit 172 285 IPR008218 GO:0034220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1292 Lele-ChrLele06 8230077 8238022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1292 158 295 Primary Pumps ATPases(2) AT4G02620 81.159 1.97e-76 228