Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1266 ATGGAGTTCAGGTACCCAGAAGAGTCAAAGAGCTGGAGCGAAGAAAGTGATGATCGATCGGAGCATAATGATGAAAGGGGAAGTGGAAGATCCTACGAGTGTGTGTTTTGCAAGAGAGGATTCACCACAGCACAAGCTTTAGGTGGACACATGAATATTCACAGGAAAGATAGGGCCAAGTCCAGCAAACCCAGTTTAATTCCTGCTTCCACTTCAACCAAACTGCTTGACGACCATGAGATCGACCATGCAATCTCAAGTTTTCCACCACCAGGGAATTACTTAGATCACAACAACAGTAATTATAATTATGATTACCCTCCCTCCCAAATTTCTTTTCCTGCAGTACATCAGTACAGTGATCAAAGGGATCAGGACTTGTTCGGAGGCGATTATAATTGGAGGACGGGTTTGGCTTTGCCTAACCCACTGTGTGTGCCTGATAATAAAGACAAGATTGGAGATAGCAGTGAAGAAGATGGTCTCGATTTGGAGCTTCGATTGGGTTATCATTCCTAA 519 0.4393 MEFRYPEESKSWSEESDDRSEHNDERGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSSKPSLIPASTSTKLLDDHEIDHAISSFPPPGNYLDHNNSNYNYDYPPSQISFPAVHQYSDQRDQDLFGGDYNWRTGLALPNPLCVPDNKDKIGDSSEEDGLDLELRLGYHS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1266 172 MobiDBLite consensus disorder prediction 1 29 - -
Lele06g1266 172 Gene3D Classic Zinc Finger 8 85 - -
Lele06g1266 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Lele06g1266 172 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Lele06g1266 172 Pfam C2H2-type zinc finger 32 56 - -
Lele06g1266 172 PANTHER OS07G0101800 PROTEIN 7 171 - -
Lele06g1266 172 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1266 Lele-ChrLele06 8072643 8073161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1266 32 64 C2H2 Transcription Factor Family AT5G43540 75.758 1.23e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele06g1266 zf-C2H2_6 1.4e-05 CL0361