Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1264 ATGCATGTACCTGCCGATGGCCATAGAAAGGGGACTGGCAGAACATATAGTACTGTGATAGAAATGGAGAAATTAAAGAGAATGATGAAGAAAAGCAATGATTTTGTGGGTAAAGATCGAACCTTTGCCAGCATGAATGCTCTTGTGAGCTCCCATATCTCTGTTTCTGGTCAAAGGCATTACATTCCTGAAATCGACGCTATTAAAGTCATGGCTTCCATGGATGACAGCGCCTTTGTTTCGTCGCTGGACATGGAAAAATTCCTCTGTGAATTATTACTGGATTCCACGCAACCGATTTGTGAGCGCTTCCGGGCTCTCTTCTCTCTCCGCAATCTCAAAGGTCCCTCTCCTCGCAACGCCCTTATTCTCGCCACAAGGGATTCTTCAAATTTGTTGGCACACGAGGCAGCATTTGCACTGGGTCAAATGCAAGATGTAGAAGCCATCCCTGCTTTGGCTTCAGTTTTAAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCCGCAGAAGCTCTTGGTGCTATTGTTTCAGATGGCAATGTTCCTCTACTGAACAATAGTTTGGGTTTAGATCCTGCTCAGGAGGTTCGGGAAACATGTGAATTGGCTCTTCAACGTATTGAGCATTTGAAAGATGCTGGCAGCAGTGATGAAGTGTCTGTAACTGATGCGTCACCTTTTAAGTCTGTTGATCCTGCAGCACCAGCTGCTTCATGTTCTTCTGTGGATCAATTAAGGAAAGTACTCCTGGATGAAGAAAAAGGAATGTATGAACGGTATGCAGCTCTTTTTGCCCTACGAAATGATGGTGGAAATGAAGCTGTTACTGCTATAATTGATTCCTTGGGTTCAAAAAGTGCTCTCCTTCGCCATGAGGTTGCTTATGTTTTGGGCCAATTACAAGACAAAGCTGCTTCGGCTGCACTATCCAATATACTTAAGGATGGGAATGAGCATCCAATGGTCAGACATGAAGCTGCCGAAGCTCTTGGTTCAATTGCAGATGACCGAAGTGTAGCACTTCTTGAGGAATTTGTGGCAGATCCGGAGCCTCTTGTCTCACAAAGCTGTCAAGTTGCTTTAAGTATGCTAGAATTTGAACGATCAGGGAAACCGTTTGAGTTCCTCTTCATGCGCACGCCACTTGTTGAATAA 1161 0.4462 MHVPADGHRKGTGRTYSTVIEMEKLKRMMKKSNDFVGKDRTFASMNALVSSHISVSGQRHYIPEIDAIKVMASMDDSAFVSSLDMEKFLCELLLDSTQPICERFRALFSLRNLKGPSPRNALILATRDSSNLLAHEAAFALGQMQDVEAIPALASVLNDLSLHPIVRHEAAEALGAIVSDGNVPLLNNSLGLDPAQEVRETCELALQRIEHLKDAGSSDEVSVTDASPFKSVDPAAPAASCSSVDQLRKVLLDEEKGMYERYAALFALRNDGGNEAVTAIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSNILKDGNEHPMVRHEAAEALGSIADDRSVALLEEFVADPEPLVSQSCQVALSMLEFERSGKPFEFLFMRTPLVE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1264 386 Coils Coil 195 215 - -
Lele06g1264 386 FunFam Deoxyhypusine hydroxylase 235 376 - -
Lele06g1264 386 SMART E-Z type HEAT repeats 289 318 IPR004155 -
Lele06g1264 386 SMART E-Z type HEAT repeats 322 351 IPR004155 -
Lele06g1264 386 SMART E-Z type HEAT repeats 258 287 IPR004155 -
Lele06g1264 386 SMART E-Z type HEAT repeats 100 129 IPR004155 -
Lele06g1264 386 SMART E-Z type HEAT repeats 164 193 IPR004155 -
Lele06g1264 386 SMART E-Z type HEAT repeats 131 160 IPR004155 -
Lele06g1264 386 FunFam Deoxyhypusine hydroxylase 77 227 - -
Lele06g1264 386 Pfam PBS lyase HEAT-like repeat 291 317 IPR004155 -
Lele06g1264 386 Pfam PBS lyase HEAT-like repeat 324 350 IPR004155 -
Lele06g1264 386 Gene3D - 230 373 IPR011989 -
Lele06g1264 386 Gene3D - 65 226 IPR011989 -
Lele06g1264 386 PANTHER PBS LYASE HEAT-LIKE PROTEIN 96 371 - -
Lele06g1264 386 Pfam HEAT repeats 122 206 - -
Lele06g1264 386 SUPERFAMILY ARM repeat 164 365 IPR016024 -
Lele06g1264 386 Hamap Deoxyhypusine hydroxylase [DOHH]. 86 376 IPR027517 GO:0008612|GO:0019135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1264 Lele-ChrLele06 8060734 8064464 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1264 06 8060734 8064464 Lele07g1465 07 8921373 8940479 hybridization
Lele06g1264 06 8060734 8064464 Lele08g1256 08 8000560 8004974 hybridization