Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1259 ATGGGTACCAACTTGAGGCAAGTACTCAGAAGCCTCTGTTTGAATTCTGATTGGAAGTACGCCATCTTTTGGAAACTCAAACATCATGCTCGCATGATCTTGACATGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCTTTCGAGAATAAGCCCAGCCAGAAGGCCTTGGAACAGGTTGATGGCGGTCAATTCTCACATGACCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCCGGTAATCAAGTTGCAGGTCCTGGCTCATCATATGAGTTTGTTGATGACTGGCAATCCCAGTTTTCTGTTGGAATCAAGACCATTGTTGTTGTAGCTGTAGTTCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATACAGAGTTTGTAACTCATATCAGAAATCTTTTTCTGGCTGCTCAGCATTATACAATAGGCCATTCTCTTGATCAAATACAAAGTAGTGCAAAGAATGTCTCACCCCTGGATATGGACAAATTCAGACAGAGTGAGACGGTGAATAACTTGATGTCCTTCCCATGTTCTGATAAGAGCTTTTCACCTTCCTATGTTACTCAAGAAATGGCTGTTGATATAGCCAAGCATGAGGGGTCTGAGCTTAACTTTGATGGAAGTTACATCTTACTTCAGTCAGTGTCAAATTTGATGGATCTAGAGGATCAGAAATTCTTAGAAATGAGATCTCTAAACAAGAGAGAGTATGAAAAAGTGGGCAGTAGTGGCTGTAAAGACATGAGGGTAGAATCAGAAAAAAATATGTCATCATTGGCACTCAAATCTGTTTCACATGATAACAGCTTCCAAGATTTAATATGTCCATCAGAAAAGGTTGGAGCTCATTCTGCCCGCATCCCTGCAGACTTTGTTGATGCTGTTGTTTATGGGAATGATAAGCTCCCTTATGTGGAGGCTAACCAACAAGGTGTTTTCAGTGTTTTTAGACCTTCAGATGCAAACTTCCAAAAGGGCACATTAAAGTCAGAGTTTCAGACTGATCCTTGTTACAAGGATGTCCCATTTACAAGATTAAAGTTCCCTGCTGGCTGTGAGCTGCATGAAGCACTTGGATCAGATTTTCTGAAACAGAGTAAATACTGTGATTGGGAGGCATGGGTGAATCAAGATGTCAAAACTGCAGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTTCTGAATCTCGTCAAGAACATCTTTTGGAGGCAGTAGTCGCCAATGTTCACCACGGTAATAATGATGCAAATAGCGACTTATCGTTTTGTGCATCAGTGCATTCCGGCATAGCATCTGGAAGAAATCCCGAAGCTTCTATTCACACCGTGCGCACTATTAATTCAGAGTGTTGTTCTATAGATCAGCCCTCTCTTATTAGTGAGGACAAATGGCCCTGTTTGGGTTCGTCTGGAATCTGCGGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCGTGTCCTAGTTCATGTATTGAACTGTTTGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAGTCTTGTAGGCCAAGGCCAAGGGACAGACAACTGATTCAAGATCGTATTAAGGAGTTGAGAGAGTTAGTGCCAAATGGAGCAAAGTGCAGTATTGATTCGCTGCTGGAGCGCACAATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGATAAGCTAAACAAATTTGCAGACTCCAAGACGAAGGTACATCACATGGAAGCAGATGTTCTTGGATCATCTGGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAACAAGAATGGCCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACACATTTTCTTGAGATAGCAGAATCCATAAGAAGCTTGGGTCTGACAATTTTGACGGGTGCAACAGAAGCTCGTGGTGAGAAGACATGGATATGCTTTGTGGTTGAGGGCCAAAACAACAGGAATGTACACAGATTGGATATATTGTGGCCACTCGTGCAAATGCTGCAATCCCAGAATACTATGCATTCACAATGA 2181 0.4255 MGTNLRQVLRSLCLNSDWKYAIFWKLKHHARMILTWEDGYYDNPDEHDSFENKPSQKALEQVDGGQFSHDPLGLAVAKMSYRVYTLGEGIVGQVAVTGKHQWICAGNQVAGPGSSYEFVDDWQSQFSVGIKTIVVVAVVPLGVVQLGSLNNVIEDTEFVTHIRNLFLAAQHYTIGHSLDQIQSSAKNVSPLDMDKFRQSETVNNLMSFPCSDKSFSPSYVTQEMAVDIAKHEGSELNFDGSYILLQSVSNLMDLEDQKFLEMRSLNKREYEKVGSSGCKDMRVESEKNMSSLALKSVSHDNSFQDLICPSEKVGAHSARIPADFVDAVVYGNDKLPYVEANQQGVFSVFRPSDANFQKGTLKSEFQTDPCYKDVPFTRLKFPAGCELHEALGSDFLKQSKYCDWEAWVNQDVKTAEMPDEISCSQLTSESRQEHLLEAVVANVHHGNNDANSDLSFCASVHSGIASGRNPEASIHTVRTINSECCSIDQPSLISEDKWPCLGSSGICGVISPKGFSSACPSSCIELFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLNKFADSKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAESIRSLGLTILTGATEARGEKTWICFVVEGQNNRNVHRLDILWPLVQMLQSQNTMHSQ 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1259 726 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 553 595 IPR036638 GO:0046983
Lele06g1259 726 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 725 IPR043561 GO:0003700|GO:0006355
Lele06g1259 726 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Lele06g1259 726 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 540 589 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1259 Lele-ChrLele06 8013210 8018294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1259 1 718 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 42.318 4.68e-150 453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1259 06 8013210 8018294 Lele06g1259 06 8013210 8018294 ECH
Lele06g1259 06 8013210 8018294 Lele07g1462 07 8890959 8896693 hybridization
Lele06g1259 06 8013210 8018294 Lele08g1251 08 7953236 7958300 hybridization