Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1257 ATGAGCTCCTCAAAGGCCAAGTCTGTGACCTTTAAGTCTAAGAAGCCCCATATCTGCGATTCAGCCTCCAAATCCCAATCACCAGATCCCATTTCATTGAGCTCCAAAACTCCAGAGAAGGCCTCACAGCTCTCACACCGCACCAGAAACCGGGGCGTTGCGCTCTCCCTTAAGGAAGTCAGGAAAGTCGCTGAAAGCCTCCAGGAACAGAATGGCCAGCGGCAATGTAATGATCGTACGGAGCAGATAAAGTCCGCCCGAAGGAAGATTGCACCGTCTTTTGCCGAAATGCCCTCCTGCAAATCCAAGGCATCTGTGGATAAGACCGTCAAGCTGCCAGAAAAGTATGAAACTTTGGGCGAGTTCTTTGACAGCTTGGATAGCTCGATCCGATTGTTGCATTTGAAAGGTTCCTCAACCACTTTCACGAATATCTGCCCCAAAATTGAATGTTTAACTGATAGGAGATTTACGCACAGTCACCTGGCCCAGTTGAAATATATCTTTCCCGAGGCACTCGTTATAAAGAAGGTGCTCAGGCTGGATGACCGAACAAGCTGTATGAAGCCAGACCTCCATCTTACATTGAATCCCGATTCGAAGTTGCTTTCTGAAGGTGGACGTGTGCCCTTGCGAAAGTTATTTCGCACCCGGTTAAGAGATTTTTATGAATCACATCCTGAGGTTGATGAAATTCCAGAAGAAATACTGCCTGAGCCATTCAATCATCGCAAGCAAGATTGTCCTTTAGAAACATTGAGAACTACCTCATCATCTGCCACATTACCATCAAATGATGCAGTTGCACCTCGTCATGGAGCTGCAGAACCTGCATCCATACTAGATAATGCCATGATAATCAATTCAGAGCCTGCTAAGGGAGAAGAAAACTTGTCAGTGCCTGTTAACACTTCAATTGGAGCACATCATCAACAACCAGCTGTAGCCACTCATATGTCTCAATCTTTTAGAAGGCGATTTTCTCAGAAATCTGTAAAAGATGAAGCAGATGATGTGCAACAAAAGTCGTCATCAGTTTCATTACCTCCTCAATCTGTTCCAGTTTCAGAATCGAGCGTGAAGAAAAATTCATCAAGTGTAGACACTACTATGTGCCCAACAATACGTGCTTCTCCAGCTGGTTCTTCAGTTGCCACTCCAAATAAAGGTGCTTCTACTCCATCTAGGTTGATGACTCATACACCTTCATTGCCAACCCCTAAGAGATGTTACATGAGCCCGGATGACAGCTCTTGTAGCTCACCAAAAAAGTTGGTTAGGCGTTCAAATGGTTTGAAGAAGTCATTGAACTTTGACACTCCAGTGAAAAATCGGGGGACAGAGAATGAAGCTGATGATGCCGGTGGCTTATCAAGTGATGATATTTTTGATATACTCCCGGAGAGTCTTCTCCAGTCGATTAAAGAAAAGGAGAGAGTGGCAATGGAGGAAAGAGATCCAGCAATCTCACAAGCAAAAAGACGGCAAAAAATGATCGCCTGCCTCCCTAAGCTATTTAACATGATTCATCTCTTGATTCATTCAATGAATCGTTCTGTTGTCACAAAAGAGGAGCTTCTAAGCAAGATAATATCAAACCATTGTGATATTGTTGACCGGAGAGAAGTTGAAGAGCAGCTGAATTTGTTGCTAGAACTAGTTCCAGAATGGATTTCTGAAAAGTTGGCATCTAGTGGAGATCTGCTATTCTGCATAAATAAAATGCAGAACCCCGAGACCATACGATCACAACTTGCAGAAGCAAAGTGA 1770 0.4401 MSSSKAKSVTFKSKKPHICDSASKSQSPDPISLSSKTPEKASQLSHRTRNRGVALSLKEVRKVAESLQEQNGQRQCNDRTEQIKSARRKIAPSFAEMPSCKSKASVDKTVKLPEKYETLGEFFDSLDSSIRLLHLKGSSTTFTNICPKIECLTDRRFTHSHLAQLKYIFPEALVIKKVLRLDDRTSCMKPDLHLTLNPDSKLLSEGGRVPLRKLFRTRLRDFYESHPEVDEIPEEILPEPFNHRKQDCPLETLRTTSSSATLPSNDAVAPRHGAAEPASILDNAMIINSEPAKGEENLSVPVNTSIGAHHQQPAVATHMSQSFRRRFSQKSVKDEADDVQQKSSSVSLPPQSVPVSESSVKKNSSSVDTTMCPTIRASPAGSSVATPNKGASTPSRLMTHTPSLPTPKRCYMSPDDSSCSSPKKLVRRSNGLKKSLNFDTPVKNRGTENEADDAGGLSSDDIFDILPESLLQSIKEKERVAMEERDPAISQAKRRQKMIACLPKLFNMIHLLIHSMNRSVVTKEELLSKIISNHCDIVDRREVEEQLNLLLELVPEWISEKLASSGDLLFCINKMQNPETIRSQLAEAK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1257 589 CDD Cdt1_c 465 586 IPR032054 -
Lele06g1257 589 FunFam CDT1-like protein a chloroplastic 459 589 - -
Lele06g1257 589 MobiDBLite consensus disorder prediction 20 41 - -
Lele06g1257 589 PANTHER DNA REPLICATION FACTOR CDT1 12 589 IPR045173 GO:0003677|GO:0030174|GO:0071163
Lele06g1257 589 Gene3D - 458 589 IPR038090 -
Lele06g1257 589 Pfam DNA replication factor CDT1 like 112 198 IPR014939 -
Lele06g1257 589 MobiDBLite consensus disorder prediction 309 326 - -
Lele06g1257 589 SMART CDT1_2 112 239 IPR014939 -
Lele06g1257 589 MobiDBLite consensus disorder prediction 341 402 - -
Lele06g1257 589 SUPERFAMILY "Winged helix" DNA-binding domain 105 241 IPR036390 -
Lele06g1257 589 MobiDBLite consensus disorder prediction 1 53 - -
Lele06g1257 589 CDD Cdt1_m 101 242 IPR014939 -
Lele06g1257 589 Pfam DNA replication factor Cdt1 C-terminal domain 469 561 IPR032054 -
Lele06g1257 589 MobiDBLite consensus disorder prediction 309 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1257 Lele-ChrLele06 7992605 7995476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1257 6 587 Core DNA Replication Machinery Family AT2G31270 43.967 2.65e-120 366