Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1250 ATGATTGACAAGGAGGCAAATCAACCGCCTTTGAGTTCGGAAGCCATAGAAGCCTGCGAGACTGTCAAAGAAATATCATACATAGGGGTGAGGAAGAGACCTTGGGGCAAATTTGCAGCAGAGATCAGAGACACTACCAGGAACGGAACCAGAGTTTGGTTGGGAACGTTCGAGAGTGCAGATGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACGGCGCTGTTCTTAATTTTCCGGTGGAGAGGGTGAAGAAGTCTCTGCGAGACATCAAGTATGGTTGCCGCAAAGGGTGTTCGCCCGCTTTAGCCCTAAAAGAGAGGCACTGCATCCAAAAAAAACTGTCGTCAAAGGCTAAGAAAGACAAAGCCAAACAGCAATCAGGGGTGATGGTGCTTGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCAGCATTTCTGATCAAACTGCAAGCCCTAGCTAG 480 0.4833 MIDKEANQPPLSSEAIEACETVKEISYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESADEAALAYDQAAFTMRGNGAVLNFPVERVKKSLRDIKYGCRKGCSPALALKERHCIQKKLSSKAKKDKAKQQSGVMVLEDLGVEYLEQLLSISDQTASPS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1250 159 FunFam Ethylene-responsive transcription factor 2 26 86 - -
Lele06g1250 159 SMART rav1_2 26 90 IPR001471 GO:0003700|GO:0006355
Lele06g1250 159 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Lele06g1250 159 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Lele06g1250 159 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Lele06g1250 159 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Lele06g1250 159 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Lele06g1250 159 SUPERFAMILY DNA-binding domain 27 86 IPR016177 GO:0003677
Lele06g1250 159 PANTHER DNA-BINDING DOMAIN 18 153 IPR044808 GO:0003700|GO:0009873
Lele06g1250 159 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1250 Lele-ChrLele06 7954416 7954895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1250 2 157 AP2-EREBP Transcription Factor Family AT3G23240 52.795 9.88e-57 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g1250 AP2 4e-14 CL0081