Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1247 ATGGATTCAGATCCCTTTTTCTGGCAATACCCACAACCTGATTGCTCCCCTCTAGATTCCTTTGTTTCTGATTTAGTACCATTGTCCTCCTGGGACCATGATCTCTGGCTCTTCAACGACAGCTACAACAACTACTGCTTCTCACAAGATCATGCCATGTCTTGGGATGTTATGGCCAAGGATTCGTCGTCATCCGACTCCAATTCTTCAACGTTGGAGGTGGCAGTGCAACAAGAAGTCTCCTCCGGTTTCACCTGCCCCAAAGTTGAGGTGAGGCAAGAAGCTTCCCCTCCGCCGCCGGCGGCAGTGGATCAGAAGAGGGTGTACAGAGGAGTGAGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATAAGGGACTCCACCAGAAAAGGGGTCAGAGTGTGGATCGGAACATTTGACACAGCAGAAGAAGCGGCTCTGGCGTATGATCAGGCGGCATTGTCAACGAGGGGGTCACAGGCGGTACTGAATTTCCCGGAGGAAGTGGTGAGAGAGTCGCTGAGGAAGATGCCGTACAAGACATGGCAGGAAGCTTGCTCTCCGGTGTTAGCCCTCAAGAAGAAACACACCACCAAACGGAAGTCCAAGAAATCCAGAACTCCTCCTCCTCCGGCCAAAACCCAGATCGATTCTCCTCATAAGGGTGTGTTGGTGCTGGAGGATTTGGGAGCCGAATATCTTGAACAGCTTTTGGCCCTCACTACTCAGTATTGA 735 0.5265 MDSDPFFWQYPQPDCSPLDSFVSDLVPLSSWDHDLWLFNDSYNNYCFSQDHAMSWDVMAKDSSSSDSNSSTLEVAVQQEVSSGFTCPKVEVRQEASPPPPAAVDQKRVYRGVRRRPWGKYAAEIRDSTRKGVRVWIGTFDTAEEAALAYDQAALSTRGSQAVLNFPEEVVRESLRKMPYKTWQEACSPVLALKKKHTTKRKSKKSRTPPPPAKTQIDSPHKGVLVLEDLGAEYLEQLLALTTQY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1247 244 Gene3D AP2/ERF domain 108 168 IPR036955 GO:0003700|GO:0006355
Lele06g1247 244 MobiDBLite consensus disorder prediction 193 219 - -
Lele06g1247 244 FunFam Ethylene-responsive transcription factor 2 107 167 - -
Lele06g1247 244 SMART rav1_2 108 172 IPR001471 GO:0003700|GO:0006355
Lele06g1247 244 ProSiteProfiles AP2/ERF domain profile. 108 166 IPR001471 GO:0003700|GO:0006355
Lele06g1247 244 MobiDBLite consensus disorder prediction 193 207 - -
Lele06g1247 244 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Lele06g1247 244 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Lele06g1247 244 Pfam AP2 domain 108 158 IPR001471 GO:0003700|GO:0006355
Lele06g1247 244 PANTHER DNA-BINDING DOMAIN 69 238 IPR044808 GO:0003700|GO:0009873
Lele06g1247 244 CDD AP2 109 167 IPR001471 GO:0003700|GO:0006355
Lele06g1247 244 SUPERFAMILY DNA-binding domain 108 167 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1247 Lele-ChrLele06 7906345 7907079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1247 106 239 AP2-EREBP Transcription Factor Family AT3G23240 56.115 3.78e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g1247 AP2 6.9e-15 CL0081