Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1236 ATGGCTTCGCTCTCAACATGGTTTCGGTACATGGCTCACAAGCTCGAGTTCTCCATATCAATCGGCATGAAGACCTATAAAGGGGGCCAAATTACGGACAAAGAGGTAAATCATGTTATCTGGAAGAATCTCCTTCAAGGAAGGTTGACGTACTTGCAGTTGAACAAAGGACAGGAAATGGCCCCTGCCCTAGATGGAAAAGGAGTAACTCTGCTTGTTCGGAAGTTACCAAAAGCAGACCTAACGCGTGTCTTTGTAGGAGATGTAATCGTTTTGAAAGACCCTGAGAAGCAAAACAATCATTTAGTCAGAAGACTGGCTGCCATCGAAGGCTATGAAATGGCTTCTACAGATGAAAAGGATGAACCTTTTGTTCTTGAGGAGGATCAATGTTGGGTGTTGGCTGACAATCAAAATTTAAAACCCAAGGAAGCATATGATAGTAGAATATTTGGTCCAGTTCAAATGACAGACATTGTGGGCAGAGTCATATACTGCTTGCGATCTGCAGTAGACCATGGCCCTGTACAGAACAGTCACTTGGGCATGCAGAGGGATTCGTCAGTGTTGGCAATGGAACTGGATATTGATGAGATGGCAAAGAGTAACAAAGCCTGA 618 0.4401 MASLSTWFRYMAHKLEFSISIGMKTYKGGQITDKEVNHVIWKNLLQGRLTYLQLNKGQEMAPALDGKGVTLLVRKLPKADLTRVFVGDVIVLKDPEKQNNHLVRRLAAIEGYEMASTDEKDEPFVLEEDQCWVLADNQNLKPKEAYDSRIFGPVQMTDIVGRVIYCLRSAVDHGPVQNSHLGMQRDSSVLAMELDIDEMAKSNKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1236 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
Lele06g1236 205 SUPERFAMILY LexA/Signal peptidase 59 176 IPR036286 -
Lele06g1236 205 CDD S26_SPase_I 60 163 IPR019533 GO:0004252|GO:0006465
Lele06g1236 205 Gene3D Umud Fragment, subunit A 53 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1236 Lele-ChrLele06 7850530 7854324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1236 60 176 MADS-box Gene Family AT1G29960 28.455 1.21e-06 44.3