Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1229 ATGAATTCATCGCCACCGACCATTAAAAAGAATATCCTGGTCGTCCATACAATTACGGATCAGTTCCTTCCCGGATCTATTGACAATTTTATTTCCGTCGAACTGAGCTTCAAAATAGACTTCCTAGGTCACCGTCGTGCAGCGGAGCTTACAAGCCACCCTGCGACCCCATTCTCTCATCAAACTCCTTCGCTAAGGGAGATAATCTCCAGTTCCGTCGAGGTTCGGAGCTCGTCCGTCGCCTTAAGGATTCTGCTAAAGCTCCATAACTCAAGAAATCGACGAAACCGATGTTTAGTTGAGGATGCAGAAGCTTGGGGAGTCTTAGAAGTAGTTATGGAATCAAAAAATGGAAGAAAATCTGCGAAATCCAAAAATAAAGAAATCCCTTCAGTTCCTCCTGGTTTTAGATCCCTTACCTCTTTCATACTAAAAAAGGTTGCAAAGACTGATATATCTGACTGTGATCCAATTTGCATGGAGAGTATATTTCAGCTAAATGACACTTCTGCATATAAGGCAATTCTTAAGCATCGTCCATGGATACTTTTTCATCAAAGTGACCGTGACCTTGAGAAATCCGACACACAGCATTTTCCTCAAGGTTTGTCTTCAAATGCTTGTCATCCAGAAGGGGTTACTCTTGAGCCTTATGGAATTTGTCGTATCATTCCTCCTCCTACCTGGGAACCACTACGTCTTCCTGAGGAGAAAAACATATGGGAAAACTCCAAATTTGTTACTCAGATTCAGCGGATTGATGGACCTCAAGTTCAGTGCCAGCAAGAAGTTGTGGACGACTCTTCCAAAAATGCAGAGACCAAGACCAGAAGAGGTCTAAGAGTAGCTTTGGACTCTCAACCTGGTAATGAAAACCCCCGTGATGTTGAAGATTCTGAGTCTAAACCTGGCCCTACCTTCAGTCTCAGTACATTTAAGAAATTTGCTGATGATTTCAAGGCCAACTACTTCAACTGTGACAATAATGTTGTTGTGGGTTCTGATGAAAAGTGGGAGCCATCTGTGGAAAATATTGAGGGTGAGTATGGACGGATTATTCAAAATCCAACTCACAAAATTGAGGTGTTTTTTGGTAACAACTTGGGGGCTGGAGTTTTAAGCAGTGGTTTCCCAGTGGTGTCTGGTCCTCTGGAGTCACTCAAATATCCTGAATGTATGAGATCTGGATGGAACTTAAATAACACGCTTACACAATCTGGTTCTCTTCTTTTATTTGAAAGCTCTGAGGTTTCTAGCAAATTTGCCCCTCGGGTTCACGTTGGAATGTGTTTTTCTTCCTTCAATTGGAAAGTAGAAGAGCAACAGTTGTACAAATTGTGTTACATGCATGTGGGTGAGCCTAGAGTTTGGTATAGCATTCCGGGAAGATTTGCTGCTGACTTTGAAAGAGTGAGGAAGAAGCATCTCCCAGTTTTGTCTGCAGAACAGTCTGACTTGTGTGACAATTTGTTACCCTCCACCGTATTGAAGTCTGAGGGTATACCCGTACATCGCTGTGTTCAGTATCCTAGGGAGTTTGTTCTCGTCTTCCCAGGAGCATACCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTCAGTTTTGCTCCTCTTGATTGGCTGCTTCATGGACAGAAAGTTGTAGAGTTATACTGTGAACAAAGGAGAAAGACTTCAATCTCATATGATAAGCTGTTGCTTGGGGCGGCAAGGAAAGCTGTTCGGGCACAGTTTGAGATTGAACTCTGCGGAATGGGTACCCGAGATAATTTAAACTGGAAAGATGCATGTGGAAGGAATGGGATATTAACAAAAGCTTTTTATTTACGGAGAAAGAGTGAAAGATCAAAGAGGGAATTTCTTTGCGCTTCTCTGAAATCACAGAGAATGGAAAAAGATTTCGATGGCACTTGCAAAAGAGAATGTTGCATATGTCTGCGTGACTTACACTTATCTGCCATAGGTTGTCCATGTTCAACCGACAAATTTGCATGTCTTAATCATGCAAAGCAGCTCTGTCTTTGCCCTTGGAGTGACAGATTTATCCTCTGCCGTTATGAAATCAGTGAGTTGGATACCCTTTCTCTTGCTTTGGAGGGAAAAGCAAGTGTTATCCACAAATGGGCCAAAGCCGATCTTGGATTAACTGTGCACTCCGTTGCCTCCAAAAGAAATGTGAGTGGTTCATCGGCTACTCCTTTGGCAAGAGAAGCATTTTTGAATTCACTGAAACGGAAAAGAGATGCAGCTGAGTCAGAGGATACGAGCACTGATGGAATCTCTTCGAGCATCGAGGCAAAATTGAAGGCACCTTTACCTGAATCTACAAGTGTTGGTAAATCGAATGCCAAACAGAAAACGGTTGGCCACCAGTCTACAGCAACACACATTACGAGTGGCCTCACTTCTGCTGCGGCCATTAAACCTGATCCCAAGTCAAGCAATGTTGAGTCATCAATTCCAGATTTGGCTAAAAATTACCCAAAAAGGGCTAGGGATTTTCTAGGTCTTAGTCTAACTTCAGGTTATATGGCACTGCTGCCTGAACTCAGGTCATTAGATGTTTCTTCAGGTAGTTCATCAGAATCCGATGACGACGCTTCAGTAGCTGATAGTAAGAGAAATTAA 2634 0.4267 MNSSPPTIKKNILVVHTITDQFLPGSIDNFISVELSFKIDFLGHRRAAELTSHPATPFSHQTPSLREIISSSVEVRSSSVALRILLKLHNSRNRRNRCLVEDAEAWGVLEVVMESKNGRKSAKSKNKEIPSVPPGFRSLTSFILKKVAKTDISDCDPICMESIFQLNDTSAYKAILKHRPWILFHQSDRDLEKSDTQHFPQGLSSNACHPEGVTLEPYGICRIIPPPTWEPLRLPEEKNIWENSKFVTQIQRIDGPQVQCQQEVVDDSSKNAETKTRRGLRVALDSQPGNENPRDVEDSESKPGPTFSLSTFKKFADDFKANYFNCDNNVVVGSDEKWEPSVENIEGEYGRIIQNPTHKIEVFFGNNLGAGVLSSGFPVVSGPLESLKYPECMRSGWNLNNTLTQSGSLLLFESSEVSSKFAPRVHVGMCFSSFNWKVEEQQLYKLCYMHVGEPRVWYSIPGRFAADFERVRKKHLPVLSAEQSDLCDNLLPSTVLKSEGIPVHRCVQYPREFVLVFPGAYHSGFDCGFNCSESVSFAPLDWLLHGQKVVELYCEQRRKTSISYDKLLLGAARKAVRAQFEIELCGMGTRDNLNWKDACGRNGILTKAFYLRRKSERSKREFLCASLKSQRMEKDFDGTCKRECCICLRDLHLSAIGCPCSTDKFACLNHAKQLCLCPWSDRFILCRYEISELDTLSLALEGKASVIHKWAKADLGLTVHSVASKRNVSGSSATPLAREAFLNSLKRKRDAAESEDTSTDGISSSIEAKLKAPLPESTSVGKSNAKQKTVGHQSTATHITSGLTSAAAIKPDPKSSNVESSIPDLAKNYPKRARDFLGLSLTSGYMALLPELRSLDVSSGSSSESDDDASVADSKRN 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1229 877 MobiDBLite consensus disorder prediction 777 822 - -
Lele06g1229 877 Gene3D Cupin 205 560 - -
Lele06g1229 877 SUPERFAMILY Clavaminate synthase-like 388 576 - -
Lele06g1229 877 MobiDBLite consensus disorder prediction 748 822 - -
Lele06g1229 877 Pfam C5HC2 zinc finger 644 696 IPR004198 -
Lele06g1229 877 MobiDBLite consensus disorder prediction 259 278 - -
Lele06g1229 877 PANTHER LYSINE-SPECIFIC DEMETHYLASE 216 790 - -
Lele06g1229 877 ProSiteProfiles JmjC domain profile. 391 554 IPR003347 -
Lele06g1229 877 MobiDBLite consensus disorder prediction 855 877 - -
Lele06g1229 877 MobiDBLite consensus disorder prediction 283 304 - -
Lele06g1229 877 Pfam JmjC domain, hydroxylase 425 537 IPR003347 -
Lele06g1229 877 SMART cupin_9 394 554 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1229 Lele-ChrLele06 7778793 7785869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1229 216 731 JUMONJI Transcription Factor Family AT1G08620 46.816 3.03e-151 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele06g1229 JmjC 4.7e-30 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1229 06 7778793 7785869 Lele06g1229 06 7778793 7785869 ECH
Lele05g1368 05 8600989 8610001 Lele06g1229 06 7778793 7785869 ECH
Lele06g1229 06 7778793 7785869 Lele07g1430 07 8670906 8676588 hybridization
Lele06g1229 06 7778793 7785869 Lele08g1225 08 7740044 7747156 hybridization