Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1221 ATGGATTCTGCCAGAGGTTGGTTGCAGAAGTTTCATCCAAGGGATAAAATGAGGTCTTCTTTGAAGAAGAAGGAGGGTTCTGGAGGAGGAATCGAAGATTCAGATGAACAGCTGGATGAAGAAGCTCTTTCTAATATAACAAAACAAAAGGTTGCGGCAGCAAAACAGTATATAGAGAACCATTATAAGGAGCAAATGAAGAGCCTTCAGGATCGAAAGGAGCGTCGAATTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTTTTCAAGTTTCTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGCGTTGATGATTTTGAAATGTTGACTATGATTGGAAAAGGCGCATTTGGAGAGGTCAGAGTCTGCAGGGAAAAGACAACAGGGCATGTATTTGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGATAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAAGATGATGACTACCTATACCTGATTATGGAGTACCTACCTGGTGGGGACATGATGACTTTGCTTATGAGAAAGGATATCTTGACTGAGGATGAAACTAGATTTTATGTAGGAGAAACAGTTTTGGCTATTGAATCTATACATAAACACAATTATATCCATAGGAGGACTTATCGGAAGGCTTATTCTACTGTTGATACGCCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGATTGTAAGGTACTTGAGTGGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAAGCAATGCTATCTCTGGAAGCTAAAGATTTGATCAGTAAGCTATTGTGTAACGTGAATCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGTGTTGTATGGTATTGAATGGGATGATCTTTACCAAATGGAAGCTGCATTTATTCCTGAGGTTAATGATGACTTAGATACTCAAAATTTTGAGAAGTTTGATGAGATGCTCTCATCTAAAGACGTAAATTTTGTCGGATACACGTACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCCGGAATGGCCGAGTTGAAAAAGAAAGCCTCCAAAGTTAAGAGGCCATCCGTCAAGTCACTTTTTGATGGCGAGACAGCTGAAACATCAGAAGCCTCTGAGGCTTCTGCAAGCAATAATGAGTCTGCTTAA 1281 0.3989 MDSARGWLQKFHPRDKMRSSLKKKEGSGGGIEDSDEQLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQDRKERRIILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFEMLTMIGKGAFGEVRVCREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRRTYRKAYSTVDTPDYIAPEVLLKKGYGMECDCKVLEWIVNWKTHLKFPEEAMLSLEAKDLISKLLCNVNQRLGSKGAGEIKVLYGIEWDDLYQMEAAFIPEVNDDLDTQNFEKFDEMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKASKVKRPSVKSLFDGETAETSEASEASASNNESA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1221 426 ProSiteProfiles Protein kinase domain profile. 120 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1221 426 Pfam Protein kinase domain 121 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1221 426 Pfam Protein kinase C terminal domain 344 372 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele06g1221 426 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Lele06g1221 426 Gene3D Transferase(Phosphotransferase) domain 1 243 345 - -
Lele06g1221 426 MobiDBLite consensus disorder prediction 406 426 - -
Lele06g1221 426 SMART pkinase_C_6 326 374 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele06g1221 426 Gene3D Phosphorylase Kinase; domain 1 54 242 - -
Lele06g1221 426 MobiDBLite consensus disorder prediction 1 38 - -
Lele06g1221 426 SUPERFAMILY Protein kinase-like (PK-like) 93 366 IPR011009 -
Lele06g1221 426 ProSiteProfiles AGC-kinase C-terminal domain profile. 326 382 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele06g1221 426 PANTHER SERINE/THREONINE-PROTEIN KINASE 247 362 - -
Lele06g1221 426 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Lele06g1221 426 MobiDBLite consensus disorder prediction 7 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1221 Lele-ChrLele06 7682193 7687654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1221 248 402 AGC Kinase Gene Family AT1G03920 64.467 1.47e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele06g1221 Pkinase 1.2e-27 CL0016