Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1220 ATGAAAGTGGGATTTGAGGCGATTCATGGCGATTTCAACATGATCCGACCACATATGCATGAATCTTGGGACTACCCGAATAATGTTGGGTTGTCTTCATCAGTTGCAACATCATCATCGCCATCAATCCCATTTTCAAAGCAGCCACCACCCATTGACGATACTGTAAACCTGCAGGCAACAAACGAGTTTTCAGATTGGGTGGAGCATTTTACCAAACACCTTGTGGACGACTTACCAGCTGAAACCACCACATCTGATCATAACTTTCTTCCTCCTTACAACCACCATCACCAAACAAGGTCTTCTTCTCATGACAACCTCGTACCCACACTAGTTTCACCTGTTGTTGTATACCCTAGAAAAGTCCATGGTCCCTTCAACAATAACGACCTGCAAATTCAAATTCAAACTCAAACACAAACGAACCCAGTAGATCATCATGATGACCAAAACAATGATGGTGATGGGTTACCTCTTTTAACACTTCTAATGGAGTGTGCAGTTGCAATCTCAGTGGACAACCTCAGTGAAGCACACAGGATGTTGCTCGAGCTAACCCAAGTTGTCTCACCTTACAAGCCTTCCTGTGCAGAGCGTATTGTTGCGTACTTTGCTAAAGCCATGGCTAGCAGAGTCATGAACTCATGTCTTGGAGTATTTTCCCCATTGATTGATCACAGAAGAATTCACTCTTCATTCCAAGTGTTCAACAACATTTCACCTTTCATCAAATTCGCTCATTTCACTTCAAGTCAAGCCATCCTCGAAGCAGTGCATCACAGTGATAACATTCATATAATAGACTTAGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCACATCCTCGCCACACGAATGGAAGGTCGACCACGAGTTCGAATGACAGGCATGGGGGCTTCCATGGACCTCCTCGTAGAAACAGGCAAACAACTGACGAACTTCGCTAAAAGGTTGGGAATGTCGTTTTATTTCCAACCAATCGCGAGGAAGTTCGGGGATATAGAGGATGTTGTCTCCATGGTGCAAGTAAGACCCGGCGAGACAGTCGCGGTTCACTGGCTACAACACTCGCTGTACGACGCCACAGGACCAGACTGGAAAACTCTCAGACATCTTGAAGAACTAGAGCCAAGGATCATAACGTTGGTGGAACAAGATGTTTCAAACGGCGGGTCGTTTTTGGATCGTTTTGTCGGGTCATTACACTATTACTCAACTGTGTTTGATTCTCTTGGAGCTTATATGACGAGTGAGGACCCGAACAGGCACAAGGTTGAACACGAGCTTCTGTCTAGAGAGATAAATAATATATTGGCGATCGGAGGGCCGGCGAGAAGTGGAGAAGACAAGTTCAGACAATGGAGAAACGAGCTTGCGGCGAGGCATTGTTTTGTGCAGGTTCCGATGAGCCCTAATTCTATGGCTCAAGCTCAATTGATATTGAACATGTTCTCATCTTCTCCTTCTTCTTCCCGTGGCCATGGTTATACTCTGGCTCAAGTTGATGGCACGCTCAGGCTTGGATGGAAGAACACTGGCTTGTATACTGCTTCTTCATGGACATGTTATTCCCCTAATAATAATAATATGAAATAA 1605 0.4498 MKVGFEAIHGDFNMIRPHMHESWDYPNNVGLSSSVATSSSPSIPFSKQPPPIDDTVNLQATNEFSDWVEHFTKHLVDDLPAETTTSDHNFLPPYNHHHQTRSSSHDNLVPTLVSPVVVYPRKVHGPFNNNDLQIQIQTQTQTNPVDHHDDQNNDGDGLPLLTLLMECAVAISVDNLSEAHRMLLELTQVVSPYKPSCAERIVAYFAKAMASRVMNSCLGVFSPLIDHRRIHSSFQVFNNISPFIKFAHFTSSQAILEAVHHSDNIHIIDLDIMQGLQWPAFFHILATRMEGRPRVRMTGMGASMDLLVETGKQLTNFAKRLGMSFYFQPIARKFGDIEDVVSMVQVRPGETVAVHWLQHSLYDATGPDWKTLRHLEELEPRIITLVEQDVSNGGSFLDRFVGSLHYYSTVFDSLGAYMTSEDPNRHKVEHELLSREINNILAIGGPARSGEDKFRQWRNELAARHCFVQVPMSPNSMAQAQLILNMFSSSPSSSRGHGYTLAQVDGTLRLGWKNTGLYTASSWTCYSPNNNNMK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1220 534 Pfam GRAS domain family 161 524 IPR005202 -
Lele06g1220 534 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 133 520 IPR005202 -
Lele06g1220 534 ProSiteProfiles GRAS family profile. 151 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1220 Lele-ChrLele06 7677586 7679190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1220 151 524 GRAS Transcription Factor Family AT3G54220 52.356 3.16e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele06g1220 GRAS 2e-95 CL0063