Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1211 ATGGACTTCCGAGTTCTGGGTGTTCTTCTGGTGCTTCCTCGCCACATGCAACTGCTGCACCAAATCGATTCGCTGGGTTCAAGCGATTGGGAGGAGATTGAGGAGAGACACGTGGAGGAGCAGTGTCTTCTGTCCAGGGATCGGGGATCCGTAACTTGCTGGCCTTCGGCGTTGGTTTGCTGGATAGGAATTTTCCACTTGTTCTTAGGGTTCTTTCTGTTTTCTGGAGTGAATTCTGAAGCCAATTGTTGGAACAGTATGAAAAGTAGAATCAGAGAAAGAAGGAGGCGCGATATCAGCAGAAGTTTGCGGAGGATAATGAAGTGCCTATGTTCAGGGGAGCAGCTAAGAGGAGCAGACGAAATGTTTCCTTCATCTGAATCTCATGTATCCAAGGATTATTCAGTGAGTGGGGATTCTTGCACAGCTGGAGAAGTTGACAAGAAGAAGCCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGTTACTTGAACTACGAGGAAGCTAGAGCTCTGTTAGGAAGATTTGAATTTCAGAAAGGCAACATTGAAGCTGCTTTACATGTTTTTGAAGGAATAGATATAGGCGCTGTGACTCCTAAAATTAAAGTTTCCCTTGCCCAAAGGGAAGAACAACCTAAGAGATATAAGAGGCATTCCCAGCATAATTCTGCACCCCCAATGTCAATACATGCTGTTGGCCTACTGTTGGAAGCGGTACTCCTGAAAGCAAAATCGTTACAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTAATTCTGGACATAGTTGAATCTTCATTACCTGAAGGTTTTCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTGCGTCTTATAGGAGGGCACTTCTTCATCGATGGAATCTTGATGCAGAGACAACAGCAAAGATTCAGAAAGAGTTTGTCATATTTCTTCTATATAGTGGGGGGGAAGCAAACCCCCCAAATCTCCGTTCTCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATTTTGGTAAGAAAAGTCACTTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTATCTGTTTCCGGGGATTTGACAACTCTAGCTAATCAATTGAAAGAATTGCTCCCTGGGACTGTCAGCCGACGAGAAAGGTATTTTACTCTGGCTCTCTGTTATTTTGGAGCTGGAAAGGAATTGATGGCCCTGGATCTTCTCAGAAAAGTGTTGAGTAGTAAAGAGGACCCTAAACATATTCCAGCTTTGTTAATGGCATCTAAAATATGTTCTAAGAACCCTGGTCTTGCAGAAGAAGGGGTAAGCTTTGGTTCCAGAGTGCTTGAGAGCTTGGGTGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTGCTTACTTGGCGTTTCAAATTCAGCAAATTCGAAATTAGCCATTTCTGATTCTGAGAGGTTTGAGAGGCAATCTGAGGCACTTCGTGCTCTGGAAACTGCTGGCAAAATGACTCGAATGAGAGACCACAATGTATTATATTATCTAAGTTTAGAATATGCGGAACAGAGGAAGTTGGATGCTGCACTTTATTGTGCAAAATGCCTTCTAAAACTGGAAGCTGGGTCTAATGTCAAAGGGTGGCTGTTATTAGCTCGAATATTATCAGCTAAAAAACAGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAGGAGTGCCATTGAAACATATACTCAACTTCTTGCTGTTTTTCAAGTTCAGAGGAAAACATTTGGCTCTGGGAAGAAGCTATATATGGAGAACAGAGATCCTGCTAGGAACCTGGAAGTCGAAGTATGGCATGATCTTGCCTGTGTATATATAAACCTGTCACAGTGGCATGATACTGAGACGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTACTCTGCTTCTAGATGTCATACAACAGGACTGCTGTATGAAGCAAAGGGTCTCTACAAAGAGGCTTTGAAGGCTTTTGGTGATGCTTTGAACATTGATCCCAATTATGCCCCAAGCTTGATTTCCAGTGCAATGGTTCTGAGACGGCGCAGTAGCAGTAAGGAATCAAATGCTGTAGTGAGAAGCTTTTTGATGGATGCTCTGAGCCATGATAGATTGAATGCTGGTGCATGGTATAATCTTGGCCTTGTTCACAGGGATGAGGGCACAGTCTCGTCATTAACGGAAGCTGCGGAATGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAATCTTTCGGATGA 2475 0.4287 MDFRVLGVLLVLPRHMQLLHQIDSLGSSDWEEIEERHVEEQCLLSRDRGSVTCWPSALVCWIGIFHLFLGFFLFSGVNSEANCWNSMKSRIRERRRRDISRSLRRIMKCLCSGEQLRGADEMFPSSESHVSKDYSVSGDSCTAGEVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRFEFQKGNIEAALHVFEGIDIGAVTPKIKVSLAQREEQPKRYKRHSQHNSAPPMSIHAVGLLLEAVLLKAKSLQALGRFKEAAQSCKVILDIVESSLPEGFPENFGAECKLQETLSNAVELLPELWKLADCPREAIASYRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEANPPNLRSQMDSSFVPRNNIEEAILLLMILVRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANQLKELLPGTVSRRERYFTLALCYFGAGKELMALDLLRKVLSSKEDPKHIPALLMASKICSKNPGLAEEGVSFGSRVLESLGDRCDKLESVANCLLGVSNSANSKLAISDSERFERQSEALRALETAGKMTRMRDHNVLYYLSLEYAEQRKLDAALYCAKCLLKLEAGSNVKGWLLLARILSAKKQFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRSAIETYTQLLAVFQVQRKTFGSGKKLYMENRDPARNLEVEVWHDLACVYINLSQWHDTETCLSKSKAIKLYSASRCHTTGLLYEAKGLYKEALKAFGDALNIDPNYAPSLISSAMVLRRRSSSKESNAVVRSFLMDALSHDRLNAGAWYNLGLVHRDEGTVSSLTEAAECFEAAHFLEETSPVESFG 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1211 824 SUPERFAMILY TPR-like 428 647 IPR011990 GO:0005515
Lele06g1211 824 SUPERFAMILY TPR-like 622 812 IPR011990 GO:0005515
Lele06g1211 824 SMART tpr_5 427 460 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 549 582 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 782 818 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 584 617 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 620 653 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 242 275 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 710 743 IPR019734 GO:0005515
Lele06g1211 824 SMART tpr_5 676 709 IPR019734 GO:0005515
Lele06g1211 824 SUPERFAMILY TPR-like 243 466 IPR011990 GO:0005515
Lele06g1211 824 Pfam Tetratricopeptide repeat 713 743 IPR019734 GO:0005515
Lele06g1211 824 PANTHER PROTEIN NPG1 107 823 IPR043376 -
Lele06g1211 824 MobiDBLite consensus disorder prediction 143 159 - -
Lele06g1211 824 Gene3D Tetratricopeptide repeat domain 522 656 IPR011990 GO:0005515
Lele06g1211 824 MobiDBLite consensus disorder prediction 130 161 - -
Lele06g1211 824 Gene3D Tetratricopeptide repeat domain 219 520 IPR011990 GO:0005515
Lele06g1211 824 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Lele06g1211 824 Gene3D Tetratricopeptide repeat domain 661 820 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1211 Lele-ChrLele06 7609311 7617306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1211 97 823 Calmodulin-binding Proteins AT4G28600 57.453 0.0 786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2368 13 29372247 29372995 Lele06g1211 06 7609311 7617306 CCT
Lele14g2297 14 27700061 27710881 Lele06g1211 06 7609311 7617306 CCT
Lele15g0052 15 314036 318275 Lele06g1211 06 7609311 7617306 CCT
Lele16g0054 16 349118 355066 Lele06g1211 06 7609311 7617306 CCT
Lele06g1211 06 7609311 7617306 Lele06g1211 06 7609311 7617306 ECH
Lele06g1211 06 7609311 7617306 Lele07g1407 07 8545899 8550525 hybridization
Lele06g1211 06 7609311 7617306 Lele08g1205 08 7602111 7606901 hybridization