Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1206 ATGGGGAAGAGATGGAAAATTCACATTCTCAAGGCAACCGACGATTTCAATGAGAAGTACTGCATAGGAAAAGGAGGATTCGGAAGCGTTTATAGAGCGGCATTACCAACAGAGTTAGCACAAACCATGAGGGTCACGGAGAAATGCGACTTGTACAGCTTTGGAGTGGTGGCGTTAGAGATAGTGATGGGGAAGCACCCAGGAGACCTCCTAACTTCGACGTCTTCAATGAAGTGTATGTCGTCAATGGAGGATTCAGAGATGCTTCTGGAGGATGTGCTGGATCAGAGGCTGCCACCTCCAAGAGGCCAATTAAGTGATGTAATAGCGTTCTTAGTGACAATAGGGTTGGCCTGCACGCGTAACAATCCAGAGTCTAGACCCACGATGCGTTCTGTGGCACAAGAACTTTCGGTTAAGACGCAAACTTGTGTTGCAAAGCCCTTTGGGACAATAACCAACAGCAAGTTAACGGGGTATCAGAAGTAG 489 0.4744 MGKRWKIHILKATDDFNEKYCIGKGGFGSVYRAALPTELAQTMRVTEKCDLYSFGVVALEIVMGKHPGDLLTSTSSMKCMSSMEDSEMLLEDVLDQRLPPPRGQLSDVIAFLVTIGLACTRNNPESRPTMRSVAQELSVKTQTCVAKPFGTITNSKLTGYQK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1206 162 SUPERFAMILY Protein kinase-like (PK-like) 38 142 IPR011009 -
Lele06g1206 162 Gene3D Transferase(Phosphotransferase) domain 1 15 149 - -
Lele06g1206 162 Pfam Protein tyrosine and serine/threonine kinase 36 137 IPR001245 GO:0004672|GO:0006468
Lele06g1206 162 PANTHER LEUCINE RICH REPEAT KINASE 2 8 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1206 Lele-ChrLele06 7587477 7588535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1206 38 139 Receptor kinase-like Gene Family AT1G62950 38.318 1.42e-14 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele06g1206 PK_Tyr_Ser-Thr 3.5e-08 CL0016