Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele06g1205 | ATGGAAGCACGCCCTACTTTTTCCGTTGAAAGATCAATTGCAAAGCAACTCAGTAGCATGGGAGTGTCTGGAGCACTGTCTTCATCCCTGCCTGTCCACCCAACACCCATAGAAGAGACATATTCCAAGCTACCTGATTCTCACCAGGCTTTTGTGGAAAAAGAGCGCATGGCAAGACCTCTTACTCATTCAAGTCATTCCAGCGGAGCAGTTGGGCACATGTTTTCATCATCCCCTGGATATTCTACTGATCTCCATCACTCATCCCTTTCACCTCATGGAAAACACTCAAGAAATCCGCATTTTATTTCACTGTCTTCAAGTAAAATGGCATCATTGCCATTGTCATATTCTTCAAGTACTGGACCACTGGCTTCTACAACATCATGTTGTTATTCCAAAGCAAGTAATGGATCATGGGCTACAGATTCCTTGCCAAACATTCTTGATTTTCCTGTAAATACTTCCATTAAGGATAGTCAAGTAGAAAGCAGTGCCTGCAATATAATGGCACCTGATGAGTATGGTAAGAAGAATGATTGGCAGGAGTGGGCTGACCAACTGATCAATGATGATGATGCATTGACTGCTAACTGGAATGACATTCTTGTTGACCCCAGCATTCATGATCTTGAACCAAACGTGTCATGCAAGACTTCAAAATCAACTTCACAACTGCCAGGGCTGCAGTCCCAAGGTCCCCAGCATCTTCCAGCTTCATCGGGAGAAAAAAATGTTAGTGCTCCACCCTCTTCCTCGGCAAATTCTGCTCCTGCCAAGCCACGAATGCGTTGGACACCAGAGCTTCACGAGGCCTTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCAACCCCTAAGGGTGTGCTGAAGCTTATGAAAGTTGAAGGCTTAACAATATATCACATTAAAAGCCACTTGCAGAAATATAGGACAGCTAGATATAGACTGGAGTCATCTGAAGGATCCTCGGAGAAAATGTTGACTCCAATGGAAGAGATGTCTTCTCTAGACTTAAAAACTGGCATTGAGCTCACTGAAGCTCTGAGATTGCAGATGGAGGTTCAGAAGCGCCTGCATGAACAACTAGAGATTCAAAGGAATTTACAGTTGCGGATTGAAGAACAAGGAAGGTACCTCCAAATGATGTTTGAGCAGCAATGCAAATCTGGCGTTGAAAAGTTTAAGGCAGCACCATCTGCCATGGAGGATCCCTCTGGAGTGTCGTCAGATGCTATTAAAGATTCTTCTGCCAAAACTGAAGTGGATGTCTCCCTAGTGGACCATTGCAAGTCAGGAACTGAACAAGATAATAGCAATGCCACAGTTGAAGAAAGCTCACCGAAAGTTGTTGAGAAGCAAAATGCTCCTGAAAATCAAACATCTGATAATCCTAAGCCACATACGACTGAAGATGATGCTAATGCTCAACCGTCAAAGCGTCAAAGGACAGATGAATAA | 1467 | 0.441 | MEARPTFSVERSIAKQLSSMGVSGALSSSLPVHPTPIEETYSKLPDSHQAFVEKERMARPLTHSSHSSGAVGHMFSSSPGYSTDLHHSSLSPHGKHSRNPHFISLSSSKMASLPLSYSSSTGPLASTTSCCYSKASNGSWATDSLPNILDFPVNTSIKDSQVESSACNIMAPDEYGKKNDWQEWADQLINDDDALTANWNDILVDPSIHDLEPNVSCKTSKSTSQLPGLQSQGPQHLPASSGEKNVSAPPSSSANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHIKSHLQKYRTARYRLESSEGSSEKMLTPMEEMSSLDLKTGIELTEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEQQCKSGVEKFKAAPSAMEDPSGVSSDAIKDSSAKTEVDVSLVDHCKSGTEQDNSNATVEESSPKVVEKQNAPENQTSDNPKPHTTEDDANAQPSKRQRTDE | 488 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele06g1205 | 488 | Coils | Coil | 348 | 368 | - | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 398 | 488 | - | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 433 | 466 | - | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 418 | 432 | - | - | |
Lele06g1205 | 488 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 257 | 317 | IPR017930 | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 467 | 488 | - | - | |
Lele06g1205 | 488 | FunFam | Myb family transcription factor | 259 | 317 | - | - | |
Lele06g1205 | 488 | SUPERFAMILY | Homeodomain-like | 258 | 314 | IPR009057 | - | |
Lele06g1205 | 488 | Pfam | Myb-like DNA-binding domain | 262 | 313 | IPR001005 | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 214 | 259 | - | - | |
Lele06g1205 | 488 | Gene3D | - | 259 | 318 | - | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 214 | 262 | - | - | |
Lele06g1205 | 488 | MobiDBLite | consensus disorder prediction | 82 | 101 | - | - | |
Lele06g1205 | 488 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 238 | 469 | IPR044848 | GO:0003700 | |
Lele06g1205 | 488 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 260 | 314 | IPR006447 | GO:0003677 | |
Lele06g1205 | 488 | Pfam | MYB-CC type transfactor, LHEQLE motif | 345 | 392 | IPR025756 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele06g1205 | Lele-ChrLele06 | 7580779 | 7585524 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele06g1205 | 1 | 402 | G2-like Transcription Factor Family | AT4G28610 | 49.398 | 6.43e-104 | 315 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Lele06g1205 | Myb_DNA-binding | 8.6e-09 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele06g1205 | 06 | 7580779 | 7585524 | Lele06g1205 | 06 | 7580779 | 7585524 | ECH | |
Lele05g1343 | 05 | 8432276 | 8438837 | Lele06g1205 | 06 | 7580779 | 7585524 | ECH | |
Lele06g1205 | 06 | 7580779 | 7585524 | Lele07g1400 | 07 | 8511307 | 8515549 | hybridization |