Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1204 ATGGATGTTACTTGTGCTGTAAATCCACAAAGTTGGGTAGAGCTCCAGCGAAGAACAATGTCGAAGAGAGGTCGCGGTGGATCGGCCGGGAACAAGTTCCGGATGTCACTGGGTCTGCCGGTGGCGGCAACAGTGAACTGCGCCGACAATACCGGAGCTAAGAACCTTTACATCATTTCAGTGAAGGGAATCAAAGGTCGCCTCAACCGTTTGCCTTCTGCTTGCGTGGGCGACATGGTCATGGCCACCGTGAAGAAAGGAAAGCCTGATCTGAGGAAAAAGGTCTTGCCTGCTGTCATCGTTCGCCAGCGCAAGCCATGGCGCCGAAAGGATGGCGTCTATATGTACTTCGAAGATAATGCCGGTGTCATTGTTAATCCCAAGGGTGAAATGAAAGGTTCCGCTATTACCGGTCCGATTGGCAAGGAGTGTGCTGATCTCTGGCCAAGGATTGCAAGTGCTGCTAATGCAATTGTTTGA 480 0.5146 MDVTCAVNPQSWVELQRRTMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1204 159 Hamap 50S ribosomal protein L14 [rplN]. 38 159 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele06g1204 159 Gene3D Ribosomal protein L14 20 159 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele06g1204 159 ProSitePatterns Ribosomal protein L14 signature. 98 124 IPR019972 -
Lele06g1204 159 FunFam 60S ribosomal protein L23 20 159 - -
Lele06g1204 159 SUPERFAMILY Ribosomal protein L14 30 159 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele06g1204 159 SMART Ribosomal_L14_2 38 159 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele06g1204 159 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 39 158 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele06g1204 159 Pfam Ribosomal protein L14p/L23e 41 159 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1204 Lele-ChrLele06 7574078 7576765 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1204 20 159 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.857 1.11e-98 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1204 06 7574078 7576765 Lele06g1204 06 7574078 7576765 ECH
Lele06g1204 06 7574078 7576765 Lele07g1398 07 8501992 8503691 hybridization
Lele06g1204 06 7574078 7576765 Lele08g1200 08 7568999 7570684 hybridization