Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele06g1194 | ATGGAATCGCGGACGCCGAAGACGCCCATGAAGGATTCTGAAGTTATAGTCTGTCACGGTGAGCTGTCAACATTGAATTGGAAGCCAGGTGTAGGGCCCACAACCATATTGCGAGCGATGCAGGGTGGTTCTACAGGTGGTTCGATGTTAACGGTGTCAAAGGAAGATAATTTGGTCATGTCTTCGGAGGATTCTTCATGTCCAGATGAATCTGAGCTGGATTTGGGTCTTGGCTTAAGCATTCTTTCTCGTCCTGGGCTCAAGTCCCAACCACCGTCCACGAATCAATATGCTAGATTATTAACCGCTAAAGATTTTCCTTCTATGGTTTCTTCTCATACTGCAACTTCATTAGCTTCATCAACCTCCTCATCTTCTTCTTCCTCCTCCTCTCCTTCCTCTGTCACCAGGCCTAACGCCACTGTTGGAACCAAGAGAACTGCCGATTATGTTGTTGCTACTAATGGCCCCAGTCAGGTCGTAGGATGGCCTCCCATTGGAGCATATCGAATGAACAGCTTTAACCATCATGCAAAGTCACCTGCCACTAATGTGTTCGACTCAGTGACTGAGAAAGGTAAGAGCAATAATACAGAGGCAAGGAAGAGTACTGATTCCGGCATCGATAATAGCAATGTTAGTGCCAAAGGTAAAGGGCACCTGAAGAGTTCCTGGTTTGTGAAGGTAAATATGGACGGGTTACCGATTGGAAGGAAGGTTGATTTGAGCCCTCATACTTCCTATGAGAGCTTAGCATTTGCTTTGGAAGAGATGTTCGATGAACACGCTGCAGCTGTTTCTAGTGAAATAGGATCAAATGGGGAAGAACATGGCGTTATAGTCGGAGCAGAAAGACGGTCAAAATTGCTGGATGGATCTTCCAAGTTTGTACTTACTTATGAAGACAAGGATGAAGATTGGATGCTTGTTGGAGATGTACCTTGGGGGATGTTTCTAAGCTCTGTGAGGAGGCTAAGAATCATGAGAACATCTGAGGGTACTGGACTGGCACCAAAGTGTGAAGAAAAGAACAGCAGACAGAGAAGTTAG | 1050 | 0.4571 | MESRTPKTPMKDSEVIVCHGELSTLNWKPGVGPTTILRAMQGGSTGGSMLTVSKEDNLVMSSEDSSCPDESELDLGLGLSILSRPGLKSQPPSTNQYARLLTAKDFPSMVSSHTATSLASSTSSSSSSSSSPSSVTRPNATVGTKRTADYVVATNGPSQVVGWPPIGAYRMNSFNHHAKSPATNVFDSVTEKGKSNNTEARKSTDSGIDNSNVSAKGKGHLKSSWFVKVNMDGLPIGRKVDLSPHTSYESLAFALEEMFDEHAAAVSSEIGSNGEEHGVIVGAERRSKLLDGSSKFVLTYEDKDEDWMLVGDVPWGMFLSSVRRLRIMRTSEGTGLAPKCEEKNSRQRS | 349 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele06g1194 | 349 | Gene3D | - | 220 | 342 | - | - | |
Lele06g1194 | 349 | MobiDBLite | consensus disorder prediction | 117 | 142 | - | - | |
Lele06g1194 | 349 | SUPERFAMILY | CAD & PB1 domains | 221 | 328 | - | - | |
Lele06g1194 | 349 | Pfam | AUX/IAA family | 89 | 339 | IPR033389 | - | |
Lele06g1194 | 349 | MobiDBLite | consensus disorder prediction | 200 | 215 | - | - | |
Lele06g1194 | 349 | MobiDBLite | consensus disorder prediction | 180 | 215 | - | - | |
Lele06g1194 | 349 | ProSiteProfiles | PB1 domain profile. | 224 | 332 | IPR000270 | GO:0005515 | |
Lele06g1194 | 349 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 71 | 332 | IPR003311 | GO:0005634|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele06g1194 | Lele-ChrLele06 | 7523029 | 7526549 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele06g1194 | 228 | 339 | B3 DNA Binding Superfamily | AT1G59750 | 33.036 | 3.26e-12 | 65.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Lele06g1194 | AUX_IAA | 1.7e-58 | CL0072 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele13g2358 | 13 | 29319269 | 29324212 | Lele06g1194 | 06 | 7523029 | 7526549 | CCT | |
Lele14g2290 | 14 | 27655012 | 27659773 | Lele06g1194 | 06 | 7523029 | 7526549 | CCT | |
Lele15g0060 | 15 | 358037 | 363837 | Lele06g1194 | 06 | 7523029 | 7526549 | CCT | |
Lele16g0064 | 16 | 399884 | 401718 | Lele06g1194 | 06 | 7523029 | 7526549 | CCT | |
Lele06g1194 | 06 | 7523029 | 7526549 | Lele06g1194 | 06 | 7523029 | 7526549 | ECH | |
Lele06g1194 | 06 | 7523029 | 7526549 | Lele07g1388 | 07 | 8443426 | 8448133 | hybridization | |
Lele06g1194 | 06 | 7523029 | 7526549 | Lele08g1188 | 08 | 7514363 | 7517875 | hybridization |