Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1193 ATGTGGACGCACGTAAGCAAGCTTCTCAGAGACCTTCTCTTCACGCGCTTAAGATTGGATCCATATGGAGTGAAGAAGAATAAGATGCAACTGAAAATTCTGCTCTTCTTCTGTTACATTTTCTGTTTCTCTCACGGTCTTGCTTCTGTTTTGAATGATGAAGTTTCTGCTCTACTTTCTATAAAAGCAGGTCTGGTCGATCCGTTGAATAAGCTGCAGGATTGGAAATTGCGGGACAAGGCACCAAGAAAAGATGCAACACATTGTAACTGGTTGGGTGTCTCGTGCAATGCTGCTGGAGCAGTTGAGAAGCTTGATCTATCCCACATGAATCTCAGTGGCAAAGTATCTGATGAGATACAAAAGCTACGAAGTCTCACTACTCTAAACTTGAGCTGCAATGGATTCTCCACCACACTGCCAAAATCTGTAGCCAACCTCACCACATTGAGAAGTCTTGATGTTAGCCAGAATTTCTTCGTTGGTGATTTTCCATCAGGTCTTGGAAAGGCACCACGACTTGTGATTTTAAATGTATCCGGTAATGATTTCTCAGGTTTTATTCCTGAGGACCTTGGAAATGCTTCTTTCTTAGAGACGCTGGATCTCAGAGGCAGCTTCTCCCAGGGGTCTATTCCAAAATCGTTCAGTAGATTGCAGAAGTTGAGGTTCCTTGGTCTTTCTGGAAATAATCTCACCGGAGGAATTCCAGGAGATCTTGGACAGCTTTCCTCACTGGAGTATATGATTCTCGGATACAATGCATTTAAGGGTGGGATTCCCAGAGAGTTTGGAAATCTCACCAATCTCAAGTATCTTGATATGGCAGAAGCCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTGAACACAGTTTTCTTATACAGAAACAATTTTAAAGGCAGAATCCCTCCTTCTTTGGGCAATCTGACTTCATTGCTGTTGCTGGATGTCTCTGATAACATGCTATCAGGAAAAATTCCACCTGAAATTGGTCAACTGAAGAATTTAGAGCTCCTAAATTTTATGAGCAACCTTCTATCTGGTCCTGTGCCTTCTGAACTTGGGGATTTGCCTCAATTGAAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGAACATTGCCAAGTCGAATGGGCAAGAGTTCACCATTGCAGTGGCTTGATGTATCATCCAACTTTCTCTCTGGTGAGATTCCAGAAACACTTTGCAGCCAGGGCAATCTCACCAAGCTTATCCTTTTCAATAATGCCTTCACAGGTCCAATCCCAGTCAACCTATCATTGTGCCCTTCACTAGTTCGTGTTCGAATTCATAACAATTTACTTAATGGGACGATTCCAGTTGGTTTTGGGAAACTTGGGAATCTTGAAAGGTTAGAATTGGCTAACAACAGTCTCACCGGTGGAATTCCTAACGACATTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCTACTATTCTTTCCACTCCGAATCTCCAATCATTCATGGTCTCGCACAACAATTTGGAAGGTGAAATCCCAGACCAATTTCAGGACTGTCCTTCACTCGGTGTTCTTGATCTCTCATCAAATCGTCTCTCTGGAAGCATTCCAGCTAGCATTGCATCTTGTCAGAAATTGGTAAACTTGAACCTAAAGAACAACCAATTGACTGGTGAAATCCCGAAGGCACTAGCCAACATGCCTTCATTGGCCATTCTTGATTTTTCCAACAACTCTCTGACTGGCGAAATACCTGATAGCTTTGGTATTTCTCCTGCTCTGGAGGCTCTCAATTTCTCGTACAACAAGCTTGAGGGTCCTGTCCCGACAAATGGCATGCTGAGGACCATTAACCCAAGTGATCTTGTGGGTAATGCTGGCCTATGTGATGGCGTCCTTCCTCCATGTGGCCAAAACTCTGCATATGCATTGAAGCATGGGAGCTCACGAGCAAAACACATAATCACAGGATGGGTCATTGGAATATCATCAGTTTTTGCTATTGGGATTGCCATTTTTGTTGCAAGATCTATGTACATAAGTTGGTACGCTAATGGCTTCTGCATTGGAGAAAAGATTTATAAGGGTGACAAAAGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAAGTACTGAAATTCTATCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGCAACTGGTGTTGTTTATAAGGCTGAAATATCGCAGTCAAATACAGTTGTGGCAGTGAAAAAGTTGTGGAAATCAGGATCTGATACTAAAGTAGGAAGTAGCGATGACCTTGTTGGAGAGGTGAATCTCTTGGGTAGACTAAGACATAGAAATATTGTTAGACTATTAGGATATCTTTATAATGACGTTGATGTTATGATAGTTTATGAATTTATGTCTAATGGCAACCTTGGAGAAGCCTTGCATGGCAGACACGCTGGAAGGTTGCTTGTAGACTGGGCTTCCCGTTATAAGATAGCTCTAGGAGTTGCACAAGGGCTTGCTTATCTTCATCATGACTGTCATCCGCCGGTCATCCACCGAGACATCAAGTCAAATAACATACTGCTCGATGCAAATCTTGAAGCAAGGATAGCAGATTTTGGATTAGCCAAAATGATGATCAGGAAGAATGAAACAGTCTCCATGATTGCTGGGTCCTACGGCTACATTGCCCCGGAATATGGATATTCCTTGAAGGTGGATGAAAAGATTGACACTTACAGCTATGGAGTGGTTCTGTTGGAGCTTCTCACAGGGAAGAGGCCACTGGATTCCGAGTTTGGAGAATCTGTGGACATTGTTGAGTGGATTAGGAGAAAGATTAGAGACAACAAGCCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACTGCAGGCATGTTGTAGAGGAGATGCTTTTAGTTCTTAGAATAGCACTTCTTTGCACTTCCAAGCTACCCAAAGACAGACCCTCCATGACAGATGTGATAATGATGCTTGAAGAGGCAAAGCCTCGGAGTAAAAGCGACAGCAACAGTAAAAAACATGAAGCTAATAAGATGATGGCAGTTTTTAGCACATCATCACCAGTTAGTGGCCTAGTGTAG 3135 0.4265 MWTHVSKLLRDLLFTRLRLDPYGVKKNKMQLKILLFFCYIFCFSHGLASVLNDEVSALLSIKAGLVDPLNKLQDWKLRDKAPRKDATHCNWLGVSCNAAGAVEKLDLSHMNLSGKVSDEIQKLRSLTTLNLSCNGFSTTLPKSVANLTTLRSLDVSQNFFVGDFPSGLGKAPRLVILNVSGNDFSGFIPEDLGNASFLETLDLRGSFSQGSIPKSFSRLQKLRFLGLSGNNLTGGIPGDLGQLSSLEYMILGYNAFKGGIPREFGNLTNLKYLDMAEANLGGEIPAELGNLKLLNTVFLYRNNFKGRIPPSLGNLTSLLLLDVSDNMLSGKIPPEIGQLKNLELLNFMSNLLSGPVPSELGDLPQLKVLELWNNSLSGTLPSRMGKSSPLQWLDVSSNFLSGEIPETLCSQGNLTKLILFNNAFTGPIPVNLSLCPSLVRVRIHNNLLNGTIPVGFGKLGNLERLELANNSLTGGIPNDIASSTSLSFIDFSRNNLHSSLPSTILSTPNLQSFMVSHNNLEGEIPDQFQDCPSLGVLDLSSNRLSGSIPASIASCQKLVNLNLKNNQLTGEIPKALANMPSLAILDFSNNSLTGEIPDSFGISPALEALNFSYNKLEGPVPTNGMLRTINPSDLVGNAGLCDGVLPPCGQNSAYALKHGSSRAKHIITGWVIGISSVFAIGIAIFVARSMYISWYANGFCIGEKIYKGDKRWPWRLMAFQRLNFTSTEILSCIKETNVIGMGATGVVYKAEISQSNTVVAVKKLWKSGSDTKVGSSDDLVGEVNLLGRLRHRNIVRLLGYLYNDVDVMIVYEFMSNGNLGEALHGRHAGRLLVDWASRYKIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDTYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRIALLCTSKLPKDRPSMTDVIMMLEEAKPRSKSDSNSKKHEANKMMAVFSTSSPVSGLV 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1193 1044 Pfam Leucine rich repeat N-terminal domain 52 97 IPR013210 -
Lele06g1193 1044 Gene3D Ribonuclease Inhibitor 409 649 IPR032675 -
Lele06g1193 1044 Pfam Protein kinase domain 735 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1193 1044 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 51 206 - -
Lele06g1193 1044 Gene3D Phosphorylase Kinase; domain 1 732 817 - -
Lele06g1193 1044 Gene3D Transferase(Phosphotransferase) domain 1 818 1038 - -
Lele06g1193 1044 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 392 652 - -
Lele06g1193 1044 SUPERFAMILY L domain-like 51 326 - -
Lele06g1193 1044 Pfam Leucine Rich Repeat 461 480 IPR001611 GO:0005515
Lele06g1193 1044 SMART LRR_typ_2 363 387 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 267 291 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 219 243 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 459 483 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 531 555 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 315 339 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 579 603 IPR003591 -
Lele06g1193 1044 SMART LRR_typ_2 123 147 IPR003591 -
Lele06g1193 1044 SUPERFAMILY Protein kinase-like (PK-like) 723 1010 IPR011009 -
Lele06g1193 1044 SMART serkin_6 733 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1193 1044 Gene3D Ribonuclease Inhibitor 303 408 IPR032675 -
Lele06g1193 1044 PANTHER RECEPTOR-LIKE PROTEIN 55 461 1013 - -
Lele06g1193 1044 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 207 307 - -
Lele06g1193 1044 Pfam Leucine Rich repeat 123 137 IPR001611 GO:0005515
Lele06g1193 1044 FunFam MDIS1-interacting receptor like kinase 1 818 1028 - -
Lele06g1193 1044 ProSiteProfiles Protein kinase domain profile. 733 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1193 1044 Pfam Leucine rich repeat 508 568 IPR001611 GO:0005515
Lele06g1193 1044 Gene3D Ribonuclease Inhibitor 50 205 IPR032675 -
Lele06g1193 1044 Gene3D Ribonuclease Inhibitor 206 302 IPR032675 -
Lele06g1193 1044 FunFam Leucine-rich repeat receptor protein kinase EMS1 308 391 - -
Lele06g1193 1044 ProSitePatterns Protein kinases ATP-binding region signature. 739 763 IPR017441 GO:0005524
Lele06g1193 1044 FunFam MDIS1-interacting receptor like kinase 1 733 817 - -
Lele06g1193 1044 SUPERFAMILY RNI-like 299 618 - -
Lele06g1193 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 860 872 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1193 Lele-ChrLele06 7516500 7521500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1193 32 1044 Receptor kinase-like Gene Family AT1G08590 57.793 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele06g1193 Pkinase 7.5e-47 CL0016