Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1191 ATGCGCACCGATTCTTCTGGTGATGTGGATTTCACCCACGTCAGCAATCTGCGTCAACTTAACTATTCTTCTCGTGTTTCTCCTTGTAATCTCAGCGAGGCAGTTCTAGTGTTAGGATTTGATGCAGCTGCTTTGATCAAAGAATCGACTCATGGGAACACTGTGAACTGGTGGCTTCTTTCTTTGCCATCCGTTCAGGGTTTAGCTTGAGAACTTATGGTGGAAGGTTCAAAACATCTTTCTTCTCATGTTGTGGTGAATTTTGCTGCCACTCCAGCTCTTGCTTTCCTGTGCATTGTTGCAATTCGAGGTGGTACTGGCATAAGAGTTAGTAGAAACTCTGATCTTCAAGAGCCATTACTTGCTGAAGAAGAAGAAGTAGGTTGTCTCAAGGTTACTCCATATAATGATGCTGGCATTTTTAGCCTGGCCACTCTCTCTTGGCTCAACCCACTTCTCTCAGTTGGGGCTAAGAGACCGCTTGAGCTTAAGGACATTCCCCTTCTTGCGCCAAAAGATCGAGCTAAGACCAATTATAAGATTTTGAACTCTAACTGGGAGAGATTGAAGGCTGAAAATCCTTTAAAGCAGCCTTCATTAGCTTGGGCAATTCTCAAGTCTTACTGGAAGGAGGCAGCTTGTAATGCCATCTTTGCCGGTATGAATACCCTTGTCTCGTATGTAGTTGACTGCAGCTTCCTTTCCTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTAAGAGTGTGTGGTTCAGAAGCATATGTCCCCCAATCAGCATGGATACAGTCAGGAAATATTGAAGAAAATATCCTTTTTGGAAGCCCCATGGATAAAGCAAAGTACAAGAGAGTTCTTCATGCTTGTTCACTGAAGAGGGACTTGGAACTTTTCTCTCATGGAGACCAAACAATTATAGGTGATAGAGGTATAAACTTGAGTGGAGGCCAGAAACAGCGAGTGCAGCTTGCACGAGCTCTTTATCAAGATGCTGATATTTACCTCCTCGATGATCCCTTCAGTGCAGTTGATGCTCACACTGGATCAGAACTGTTTAACCAATACATATTGACGGCACTAGCAGATAAAACAGTTATGTTTGTGACCCATCAAGTGGAATTTCTCCCTGCAGCTGATTTGATACTGGTTCTTAAAGAAGGCCACATCATACAGGCCGGAAAATATGATGATCTTTTACAAGCAGGAACAGATTTTAAAACTCTAGTTTCGGCTCATCACGAAGCCATTGAGGCTATGGATATTCCTAATCAGTCAGAAGATTCAGATGAAAATGTGTCCTTGGAGGCATCTGTTATGGCCAGTAAAATGTCCATTATCTCTGCAAATGATATTGAAAGTCTGGCAAAGGAAGTGCAAGAGGGTTCATCAGTTTCAGATCAGAAAGCAATCAAGGAGAAGAAGAAAGCGAAACGGTCAAGGAAGAAACAGCTTGTTCAGGAAGAGGAGAGGGTAAGAGGTAGGGTCAGCATGAGGGTGTACTTGTCATACATGGCTGCAGCATATAAAGGCTTGCTCATTCCACTCATAATCATTGCACAAGGATTATTTCAGTTTCTTCAAATTGCTAGTAATTGGTGGATGGCCTGGGCAAATCCTCAAACTGAAGGAGACCAACCCAAAGTAACTCCTATGGCTCTTCTTCTGGTGTACATGGCTCTTGCTTTTGGAAGCTCTTGGTTTATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCAGCTGCACAGAAACTTTTTATGAAGATGCTTCGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCCACGCCAGCTGGAAGGATATTGAATCGTGTATCGATTGATCAGAGTGTTGTGGATCTTGACATTCCTTTTAGACTAGGAGGATTTGCTTCGACAACAATACAGCTTATTGGCATTGTTGGTGTAATGACCAAGGTTACCTGGCAAGTTTTGCTTCTGGTTGTCCCAATGGCTTTGGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCTTCAAGGGAGCTGGTTCGTATAGTAAGCATCCAGAAATCTCCAGTTATACATCTTTTTGGCGAATCAATTGCTGGAGCAGCCACCATCAGGGGTTTTGGACAAGAAAAAAGATTCATGAAGAGAAACCTCTATCTTCTGGACTCTTTTGCACGGCCATTCTTCTGCAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGTATGGAATTATTGTCAACCTTTGTATTTGCTTTCTGCATGATATTACTAGTTAGCTTTCCGCATGGAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACGTATGGGTTGAATTTAAATGCACGTCTGTCACGGTGGATTCTCAGCTTTTGCAAACTTGAGAATAAAATAATTTCTATCGAAAGGATTTATCAATACAGCCAAATTCCTAGTGAAGCACCAAGTGTTATTGAAGACACTCGCCCTCCATCCACATGGCCTGAGAATGGGACTATCAGTATAATTGATTTGAAGGTTCGTTACAAGGAGAACCTTCCATTGGTGCTTCATGGAACATCATGCACTTTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGAACTGGCAGTGGCAAATCTACTTTGATACAAGCATTGTTTCGATTGGTTGAACCATCAAGTGGGAGTATCCTTATAGACGGCATTAATATTTCAAGCATTGGTCTTCATGACCTTCGAAGCCGTCTCAGTATCATACCTCAAGATCCAACTTTATTTGAAGGGACTATACGAGGCAATCTAGACCCTCTTGACGAGCACTCCGATAAAGAGATTTGGGAGGCACTAGAGAAGTCTCAGCTCGGAGAGATCATTCGTCAGAAAGAGGAAAAGCTTGACACACAAGTGCTTGAAAATGGAGATAATTGGAGCGTAGGGCAGCGACAACTTGTGGCGCTGGGGCGGGCTTTATTGAAGCAGTCAAGGATACTTGTACTAGATGAAGCAACAGCATCAGTTGATACAGCCACTGATAATCTTATACAGAAGATTATTCGGACAGAGTTTAGAGACTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTGGTCCTCAGTGATGGTCGAGTGGCAGAGTCTGACACGCCACTGCGACTATTAGAGGATAAGTCCTCCATGTTTCTGAAGTTGGTGACAGAGTATTCATCAAGGTCAAGTGGCATACCAGATTTTTGA 3240 0.4312 MRTDSSGDVDFTHVSNLRQLNYSSRVSPCNLSEAVLVLGFDAAALIKESTHGNTVNWWLLSLPSVQGLAXELMVEGSKHLSSHVVVNFAATPALAFLCIVAIRGGTGIRVSRNSDLQEPLLAEEEEVGCLKVTPYNDAGIFSLATLSWLNPLLSVGAKRPLELKDIPLLAPKDRAKTNYKILNSNWERLKAENPLKQPSLAWAILKSYWKEAACNAIFAGMNTLVSYVVDCSFLSCILGEIPKLSGEVRVCGSEAYVPQSAWIQSGNIEENILFGSPMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFNQYILTALADKTVMFVTHQVEFLPAADLILVLKEGHIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPNQSEDSDENVSLEASVMASKMSIISANDIESLAKEVQEGSSVSDQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMRVYLSYMAAAYKGLLIPLIIIAQGLFQFLQIASNWWMAWANPQTEGDQPKVTPMALLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFMKMLRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTKVTWQVLLLVVPMALACLWMQKYYMASSRELVRIVSIQKSPVIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDSFARPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPSVIEDTRPPSTWPENGTISIIDLKVRYKENLPLVLHGTSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSSGSILIDGINISSIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLDEHSDKEIWEALEKSQLGEIIRQKEEKLDTQVLENGDNWSVGQRQLVALGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAESDTPLRLLEDKSSMFLKLVTEYSSRSSGIPDF 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1191 1079 CDD ABC_6TM_ABCC_D2 514 808 IPR044726 GO:0140359
Lele06g1191 1079 FunFam ABC transporter C family member 5 477 814 - -
Lele06g1191 1079 Pfam ABC transporter 850 998 IPR003439 GO:0005524
Lele06g1191 1079 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 516 786 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1191 1079 FunFam ABC transporter C family member 5 197 421 - -
Lele06g1191 1079 CDD ABCC_MRP_domain2 831 1051 - -
Lele06g1191 1079 CDD ABCC_MRP_domain1 232 388 - -
Lele06g1191 1079 Pfam ABC transporter transmembrane region 517 758 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1191 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 411 IPR027417 -
Lele06g1191 1079 FunFam ABC transporter C family member 3 816 1068 - -
Lele06g1191 1079 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 833 1067 IPR003439 GO:0005524
Lele06g1191 1079 SUPERFAMILY ABC transporter transmembrane region 513 813 IPR036640 GO:0005524|GO:0016020
Lele06g1191 1079 ProSitePatterns ABC transporters family signature. 314 328 IPR017871 GO:0005524|GO:0016887
Lele06g1191 1079 Gene3D - 231 437 IPR027417 -
Lele06g1191 1079 SMART AAA_5 232 397 IPR003593 -
Lele06g1191 1079 SMART AAA_5 859 1052 IPR003593 -
Lele06g1191 1079 Coils Coil 172 192 - -
Lele06g1191 1079 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 136 227 - -
Lele06g1191 1079 Gene3D - 816 1069 IPR027417 -
Lele06g1191 1079 Coils Coil 471 491 - -
Lele06g1191 1079 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 412 IPR003439 GO:0005524
Lele06g1191 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 823 1062 IPR027417 -
Lele06g1191 1079 Pfam ABC transporter 255 341 IPR003439 GO:0005524
Lele06g1191 1079 Gene3D ABC transporter type 1, transmembrane domain 475 814 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1191 Lele-ChrLele06 7494953 7501714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1191 255 405 Calmodulin-binding Proteins AT2G36910 33.117 3.14e-16 82.4