Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1189 ATGGACACAAAATATGGTGAATCTGTTGATAATCAGGGCTCGTCGCCAATCGTGGCCCTGCAGCAGTTGTCTGAGGGGGTTATCGATGATGGGGGGGAAGTATTGCATAGTGAGAAGACTGCCGTTTCACCCAAGGTGCCTCCTAGACATAGACGCTGTCAAAGTGAAGTTGTGACCGCAGGACTTCAAAGGAGTGATAGCTATAAGAAGTTGAAGGATCATGTGCAGAAGGCTTGGCGGACAGGAAGCAAATCCCGTGAAGAATGTTCCCCTTTGACTTTTAACCCTGAGGTCTTAGCGAACCAAAAGCGTCAGTGGTATCAGCTTAATTCCAAAACCCTGGATTGTGCAAATTATAATGAGCCAGCCTCGCTGTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCAAATCTGGAAGATGTGGAGGGTGCATTTGCAAATAGGAAGAAGTGGGAAAAAGAGGGAAAATATGCGCCCGTAGAGGTCCAAACGATGCAGCGACACAAGTCTCCAGTAACACCAGTGTTGGAGCCTCAGATTCTCTTCAAATATCCTCCTGGGAAGAAACTGACCGTGCGCATGATGGATTTAGCCTCTTTTTGCTTTCCCGGAGGTGTTAAGGCATCATTGTTGGAGAGGACTCCATCTCTAAGTGAACTGAATGAACTTTTGTATGGACAGATTCATTTGGGCAGGGATGATTTATCATTTATATTTTCACTGAAGGCAGCACAAAATGCAACTCTCTACGGGGTTTGTCTACATGTGCCTGAAATCTTACAACGGCCACCTAGTATCTTAGGCATATCGTCTCCTCTCACTTTTCCCTCTGGGGCGTGCAGCCGTTTTATGGTTTCTGCTCCTCGTTGTTTCTGTCTGCTGACTAGAGTTCCTTTATTTGAGTTGCATTATGAAATGTTAAACAGAATTCACTATGCCTTACTTCGTTTCAGTCTTGCTGCACAGGAACGTCTGAATCGGATAACTCAATTTGTAAATGAAATGACTCTTACCGGTTCTTTTCTACCACCTAAACTAGATGATCAAACAAATGAAAATGATGACACCCTAGAGAAGGAATCTTTTAGTGATTGGATGGCTTGCGCAATACCCGTTAAAGATGCAGCAGTCCTTGCTGCTGCTGCTGCAGGAATTATACCTGATGATGAAATCTCAGCCAAATTATGGGATCCTGAGTCCCCAGGAAGTATGACCCCCAGTGATGCTTCTGATATTGGCCAGGTCAGGGATGTAGATAAGGATGGAAATAAGAGTCATGATGATTGTGCTTCTGATGTACCACAAACCTATCCAAATTCTTTGGAAAGGATGTCTGGAAGCTATGAAGATGGTCATGCTTCTCCAATTGTTGGAACAGCTCATTCTTCTAGGAGTCGTGCATTGAAGCATCTTGGGAGTTCTCAGACACCTTTCAGGAGTCCGATCATAAGCATGGCATCAGAAGATGAGGACGATCTTTTTGCAAATAATGATGATGATGGGGATGAATTTTTAATGGAATGGGCTAGGGAAAATAAGAATGATTTGCTACTGATAGTGTGTCGATATCATGATCTACCTCTTCCACGTCGGGGAAGTGAAATTATTTTCCATCCTCTGGAACATCTACAGCCTATTTTGTATAGAAGGCCACCAGTTGTTGCTCTTGGCTTTCTTGAAAATTGTTTAAATTGTTATGAACCTGCTAAGGTAAATGCAAAGTTGGCTGCTGCTGAGGAAGCTCTTGCACTTTCTATATGGACAATTGTGACTATTTGTCGAGTTATGTCCCTTGAAAATCTGGTGGCATTAATTGCAGGAGTGTTGTTGGAAAAACAGGTGTTAGTAGAGTGTCCAAATCTAGGTGTTCTATCTGCTGTAGTGCTGTGTGTTATTCCCATGATTCGTCCGTTTCAGTGGCAGAGTTTGTTTCTCCCTGTTCTACCCCAGAGAATGTTTGATTTTCTCGATGCACCAGTTCCGTATATTATTGGCATACAGCAGAAGCCCGCTGATTTGAAAATAAGAACTGCTAATCTCGTTCATGTTAATTTACTTAAGGATCAGGTTAAAGTGTGTTATATGCCAAGACTTCCACGGCATAGAGAACTCATCTCTGGGTTAGGTCCATTTCATGCTAAACTTTCAAGTGAAAGTTCAATTGCGGAAAAGAGTCCTGTATATAGGTGCAACGAAGTCCAGGCTGAAGCCGCAACTCAGTTTTTGGATGTCATGTGGAAATACATGGAGTCACTTTGTTCAGATATGAGGTTACACACGATCACTAATGTACAGTCAAATAGTGATAGGGTTTCTTTGCTTCTTAAAGATAGCTTCATCGATTCGTTCCCTAGCAGGGACCGACCATTCGTTAAGCAATTGGTTGACACACAACTCTTCAGTGTTCTGTCAGACTCGCGTCTATCAAGCTTCGAGAATGACTCATATTTGTCTGACGCATCAATCTAA 2475 0.4303 MDTKYGESVDNQGSSPIVALQQLSEGVIDDGGEVLHSEKTAVSPKVPPRHRRCQSEVVTAGLQRSDSYKKLKDHVQKAWRTGSKSREECSPLTFNPEVLANQKRQWYQLNSKTLDCANYNEPASLFEHFVIVGLHPDANLEDVEGAFANRKKWEKEGKYAPVEVQTMQRHKSPVTPVLEPQILFKYPPGKKLTVRMMDLASFCFPGGVKASLLERTPSLSELNELLYGQIHLGRDDLSFIFSLKAAQNATLYGVCLHVPEILQRPPSILGISSPLTFPSGACSRFMVSAPRCFCLLTRVPLFELHYEMLNRIHYALLRFSLAAQERLNRITQFVNEMTLTGSFLPPKLDDQTNENDDTLEKESFSDWMACAIPVKDAAVLAAAAAGIIPDDEISAKLWDPESPGSMTPSDASDIGQVRDVDKDGNKSHDDCASDVPQTYPNSLERMSGSYEDGHASPIVGTAHSSRSRALKHLGSSQTPFRSPIISMASEDEDDLFANNDDDGDEFLMEWARENKNDLLLIVCRYHDLPLPRRGSEIIFHPLEHLQPILYRRPPVVALGFLENCLNCYEPAKVNAKLAAAEEALALSIWTIVTICRVMSLENLVALIAGVLLEKQVLVECPNLGVLSAVVLCVIPMIRPFQWQSLFLPVLPQRMFDFLDAPVPYIIGIQQKPADLKIRTANLVHVNLLKDQVKVCYMPRLPRHRELISGLGPFHAKLSSESSIAEKSPVYRCNEVQAEAATQFLDVMWKYMESLCSDMRLHTITNVQSNSDRVSLLLKDSFIDSFPSRDRPFVKQLVDTQLFSVLSDSRLSSFENDSYLSDASI 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1189 824 MobiDBLite consensus disorder prediction 395 440 - -
Lele06g1189 824 Pfam uDENN domain 180 258 IPR005113 -
Lele06g1189 824 Gene3D - 588 753 IPR043153 -
Lele06g1189 824 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 60 815 - -
Lele06g1189 824 ProSiteProfiles Tripartite DENN domain profile. 162 816 IPR037516 -
Lele06g1189 824 Pfam DENN (AEX-3) domain 592 688 IPR001194 -
Lele06g1189 824 MobiDBLite consensus disorder prediction 415 430 - -
Lele06g1189 824 Gene3D - 114 340 - -
Lele06g1189 824 SMART DENN_cls 288 690 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1189 Lele-ChrLele06 7471130 7480201 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1189 06 7471130 7480201 Lele13g1879 13 26633010 26636438 CCT
Lele06g1189 06 7471130 7480201 Lele14g1816 14 24973621 24986104 CCT
Lele06g1189 06 7471130 7480201 Lele15g0530 15 3094996 3098046 CCT
Lele06g1189 06 7471130 7480201 Lele16g0546 16 3034691 3036694 CCT
Lele06g1189 06 7471130 7480201 Lele06g1189 06 7471130 7480201 ECH
Lele06g1189 06 7471130 7480201 Lele07g1381 07 8395248 8403696 hybridization
Lele06g1189 06 7471130 7480201 Lele08g1183 08 7466075 7475286 hybridization