Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1183 ATGGAGAACCTGTTTGGCTTAGTTGATCATGAAGACTTGTTCTCTCGGCGCTGCATTTGGGTGAACGGCCCTGTGATCGTCGGAGCAGGCCCCTCCGGCCTCGCCACGGCGGCTTGTCTCAGAGAACAAGGCGTGCCGTTCGAGGTTCTCGAGCGAGCCGATTGCATAGCTTCTCTCTGGCAGAAGCGAACCTACGACAGGCTCAAGCTTCACCTTCCTAAGCAATTCTGTCAGCTCCCCAAGGTTCCATTCCCAGACGACTTCCCTGAGTACCCTTCAAAGCGACAATTCATCGGCTACCTCGAATCATACGCCAAGCAATTCCAGATCAACCCACGATTCAACGAGTGCGTTCAATCCGCCAGGTACGATGAGACCTGCGGTTTGTGGCGAGTAAAGACCGTTTCCACCGTCGGCTCCACTCGAACTGAGGTCGAGTACATTTGCCGATGGCTCGTGGTGGCCACCGGCGAGAATGCCGAGTGTGTCATGCCCGATACCCAAGGCTTGGGTGAATTCAAAGGTGAAATCATTCATGCCTGTGATTACAAGTCGGGGGAAAATTTCAGGGGAAAGAAAGTGCTCGTTGTGGGGTGTGGCAATTCCGGCATGGAGCTCTCTCTCGACCTCTGCAACCACAACGCGTCACCTTCAATGGTTGTTCGTAGCTCTGTCCATGTATTACCCAGAGAGATTTTCGGAAAATCAACGTTCGAATTGGCCGTTATGATGTCGAAGTGGCTACCTCTCTGGTTCGTGGACAAGCTCCTATTGGTTCTTGCATGGTTGGTGCTCGGAGACGTTGAGAAATATGGGCTAAAACGGCCATCGGCGGGCCCACTGGAGCTGAAAAACACAAAGGGGAAGACCCCTGTTTTGGACATTGGAACATTGGAGAAGATTAGATCCGGAGACATAAACGTTGTACCAGGAATCAAGAGATTTAACAATCACCAAGTTGAACTAGTCAATGGGGAAACAGTAGATATTGATGCAGTTGTTCTAGCCACAGGATATCGCAGCAATGTCCCTTCATGGCTTCAGGAAGGAGAATTTTTCTCAAAGAATGGATTCCCAAAGAGGCCATTCCCACATGGATGGAAAGGAAGTGTTGGTCTTTATGCAGTTGGGTTTACAAGGAGAGGGCTATCTGGTGCTTCATCTGATGCCATGAAAATTGCTCAAGACATAGGCCAAGTTTGGAAGGACGAAACTAAGCAAAAGAAGCATAGACCTACTGCTTGCCATAGACGATGCATTTCCCAGCTTCAAAGTTGTTGGATGGGGAGGTCAAAGCTATGCTTGGCTGGAATAATAGGTCATGAAGGCGTAGCTATGGTAAGGCTTGAGGCAACAGAAACTAAATTATCCTTAATCCCCCAGTTTCGAGGAGATTTGGTAGGTCATCGTTCAAAATACCATTACCAAATAGCAAAGCCCAGAGAAGAAACAAGAAAAACCTCCAAGACTCGATCAAAGACGAGGATAATGGCATTGCCAATTACTGATCTCAACACTCTATCATCTGTTTCTTCCAATTCCACTCGTGGGTTATCATCTTCCATCTCCAAGTTCTTCATTTGCTCCGTCCCTATCAAAGACGCTCACATTCTTAAAACCTCTACAAGCTCTAATCTCAGCTGTAATGGCTCGGGAAGGTACAGGGCTATTCCTGTTCATGCCATGGCTCCCTCTTTCGGTTCTCGACTTGAAGATAGCATCAAGAATACTGTTGATGAGAATCCGGTTGTCGTTTATTCCAAAACTTGGTGCTCATATTCTTCGGAGGTGAAATCGCTGTTTAAAAAGCTCGGCGCTAAACCATTGGTCATTGAATTGGACGAAATGGGTCCGCAAGGGCCACAGTTGCAGAAGGTATTGGAGAGGCTTACAGGTCAACACACTGTACCGAATGTTTTTATTGGTGGCAAACACATTGGTGGCTGCACAGACACAGTGAAGTTGTACCGGAAAGGAGAGCTTGAACCTTTGCTATCAGAAGTTAATGCTATTGCTAAAACTACAGAGAGCTAG 2034 0.4774 MENLFGLVDHEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFEVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKVPFPDDFPEYPSKRQFIGYLESYAKQFQINPRFNECVQSARYDETCGLWRVKTVSTVGSTRTEVEYICRWLVVATGENAECVMPDTQGLGEFKGEIIHACDYKSGENFRGKKVLVVGCGNSGMELSLDLCNHNASPSMVVRSSVHVLPREIFGKSTFELAVMMSKWLPLWFVDKLLLVLAWLVLGDVEKYGLKRPSAGPLELKNTKGKTPVLDIGTLEKIRSGDINVVPGIKRFNNHQVELVNGETVDIDAVVLATGYRSNVPSWLQEGEFFSKNGFPKRPFPHGWKGSVGLYAVGFTRRGLSGASSDAMKIAQDIGQVWKDETKQKKHRPTACHRRCISQLQSCWMGRSKLCLAGIIGHEGVAMVRLEATETKLSLIPQFRGDLVGHRSKYHYQIAKPREETRKTSKTRSKTRIMALPITDLNTLSSVSSNSTRGLSSSISKFFICSVPIKDAHILKTSTSSNLSCNGSGRYRAIPVHAMAPSFGSRLEDSIKNTVDENPVVVYSKTWCSYSSEVKSLFKKLGAKPLVIELDEMGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEVNAIAKTTES 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1183 677 SUPERFAMILY Thioredoxin-like 571 670 IPR036249 -
Lele06g1183 677 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
Lele06g1183 677 Gene3D Glutaredoxin 564 673 - -
Lele06g1183 677 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele06g1183 677 FunFam Flavin-containing monooxygenase 24 406 - -
Lele06g1183 677 FunFam Glutaredoxin-C5 chloroplastic 564 673 - -
Lele06g1183 677 CDD GRX_GRXh_1_2_like 582 664 - -
Lele06g1183 677 PRINTS Glutaredoxin signature 629 642 IPR014025 -
Lele06g1183 677 PRINTS Glutaredoxin signature 643 656 IPR014025 -
Lele06g1183 677 PRINTS Glutaredoxin signature 583 601 IPR014025 -
Lele06g1183 677 Pfam Glutaredoxin 583 646 IPR002109 -
Lele06g1183 677 SUPERFAMILY FAD/NAD(P)-binding domain 190 400 IPR036188 -
Lele06g1183 677 Gene3D - 24 407 IPR036188 -
Lele06g1183 677 ProSiteProfiles Glutaredoxin domain profile. 571 672 - -
Lele06g1183 677 TIGRFAM GRX_euk: glutaredoxin 583 664 IPR011899 -
Lele06g1183 677 SUPERFAMILY FAD/NAD(P)-binding domain 25 297 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1183 Lele-ChrLele06 7383107 7399032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1183 572 671 Miscellaneous Gene Families AT4G15700 35.000 2.16e-15 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1183 06 7383107 7399032 Lele13g1869 13 26541017 26544711 CCT
Lele06g1183 06 7383107 7399032 Lele14g1809 14 24897685 24901379 CCT
Lele06g1183 06 7383107 7399032 Lele15g0540 15 3189373 3193064 CCT
Lele06g1183 06 7383107 7399032 Lele16g0553 16 3117734 3121428 CCT
Lele06g1183 06 7383107 7399032 Lele06g1183 06 7383107 7399032 ECH
Lele06g1183 06 7383107 7399032 Lele07g1372 07 8327048 8328637 hybridization
Lele06g1183 06 7383107 7399032 Lele08g1174 08 7379527 7381127 hybridization