Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1149 ATGGTTAGAGTCAGCGTCTTGAATGATGCATTAAAAAGCATGTACAATGCTGAAAAGCGAGGAAAGCGCCAAGTGATGATTAGACCTTCATCAAAGGTTATCATCAAGTTTCTTCCGGTCATGCAGAAGCATGGATACATTGGTGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATAGTTGTCGAACTTAATGGAAGGTTGAACAAGTGCGGAGTTATCAGCCCTCGTTTTGATGTTGGTGTGAAGGAAATTGAGCCATGGACTGCTAGATTGCTTCCTTCTAGGCAGTTTGGCTACATTGTTCTGACCACTTCTGCGGGCATCATGGACCATGAAGAAGCTAGGAGGAAAAATGTCGGAGGAAAGGTCCTTGGTTTCTTTTACTAG 393 0.4326 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLPVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1149 130 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele06g1149 130 FunFam 40S ribosomal protein S15a 70 130 - -
Lele06g1149 130 FunFam 40S ribosomal protein S15a 1 69 - -
Lele06g1149 130 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele06g1149 130 Gene3D - 1 69 - -
Lele06g1149 130 Pfam Ribosomal protein S8 7 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele06g1149 130 Gene3D - 70 130 - -
Lele06g1149 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele06g1149 130 SUPERFAMILY Ribosomal protein S8 4 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1149 Lele-ChrLele06 7155744 7156304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1149 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.923 9.75e-92 259