Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1145 ATGGTGCTCCGCAAGGTTGGCCAGGTCTCTTACGAATTGGAGCTTCCCCCTGAGGCTAAAATCCACTCTGTTTTTCATGTCTCCTTGCTTAGGCCAGCAGTAGGTCAGCCAAAAGCTTTTCCTCTAGCACCATTACCTCTCTCGTCAGATGTAGAACTTCTTACCCCACGGGCGGTGCTGCAACTCCGTTGGACCAAAGAGGGCACTCTAGAGTTACTAGTTCAATGGGAGTCCCGACCGATGGAAGACTCAACCTGGGAAGATTATGATCTCCTCTCCTCGCAATATCCATCTTTTCGCCTTGAGGACAAGTCGTTTTTCGGGGGGGCATCTTTTCATGATCAGGAATCTTGGATGGCAAAAACTGCTGGGAGTTTAAATGATTGTGACATGACTTGCAACAATTCCTCTAGACTGGAGTCCAAGCGTTTTCATCAGTGGTTCATGGATAGCCCTGAAGTGGATCTGTTTCCACGAAAGAAACAAGCAGTAGAGGTTTCAAGCAATAATTTGTTATCAGGAATGTATGGCACCGATAACCATTCATGGGGAAATTCCTCAAGTATAAATTACAGTGGAATTAGAAAAGTTAAAATTAGTGAGGTGAAGGATTCTGAGAATGTCGTCTCTGTTCCTCCAGGAGATGAGAATATTGTGTCGTTGGATGATGATTTTGGCAGAGCATACAACAATTTCTTTTCAGTATGTCAATCTTACAGCAAGGGAGATGATGGCTTATCTGTACGTCAAACCTACAAGGAGACTTGTAATACAATAACAATGGGCCAGGCATTCGGCAAGGAGGATAGTAATATTATGGCTATTTCTCAAGATCATAATAAGGCAGAGGATAATTCTATTTCAAGACACGACATATTCAATAAGGGGGAGGATGGCACCATGTCAGTGAATCATGCCTACCACCAGGATAGAAGTAACAAGTTATCAATTGCTTGCTCTTATATCAATGGAGAAAGCACGATTATATCCTTCGGTGTATGTGATGATGATGATGGTCATGTTAGTATAACTCCCTCTGGCAGACTCATAACCAACTATGAACTGTTGATGGGCCAACCACCTAGACAGAGATCAGAAGCTGTAAATGAGAAAGAATTGATTATTTCTAATTCTGGCTCCCTACTTAGTGCCTCCTTGACATCTGCTTCTGGAACTGGAAATGTTTCCCAGACAAAAGAGGAATCTAAAACGTCTAAGAAATTTCCTTCAAATAACTTCCCTTCTAATGTCAGAAGTTTGCTGTCCACTGGCATGCTGGATGGAGTCCCTGTGAAGTATATGGCCTGGTCACGGGAGGAACTTCGTGGTATCATAAAAGGGTCCGGGTTATTAATGCATGAGTTTGAGCGTCATGCTGGTCGCAAGACGAAGCACCCCAATAATCACATTTACTTTGAAAATGGGAAAACTATATATGGGATTGTTCAGGAGCTCAGGAGCACCCCACAAAATATGTTGTTTGATGTTATTCAGACAATAACTGGTTCGCCAATCAATCAGAAATCCTTCCGCATTTGGAAAGAATCCTTTTTAGCTGCAACGCGTGAACTTCAACGCATATATGGAAAAGATGAATTGAAGCAATTGTCATAA 1614 0.425 MVLRKVGQVSYELELPPEAKIHSVFHVSLLRPAVGQPKAFPLAPLPLSSDVELLTPRAVLQLRWTKEGTLELLVQWESRPMEDSTWEDYDLLSSQYPSFRLEDKSFFGGASFHDQESWMAKTAGSLNDCDMTCNNSSRLESKRFHQWFMDSPEVDLFPRKKQAVEVSSNNLLSGMYGTDNHSWGNSSSINYSGIRKVKISEVKDSENVVSVPPGDENIVSLDDDFGRAYNNFFSVCQSYSKGDDGLSVRQTYKETCNTITMGQAFGKEDSNIMAISQDHNKAEDNSISRHDIFNKGEDGTMSVNHAYHQDRSNKLSIACSYINGESTIISFGVCDDDDGHVSITPSGRLITNYELLMGQPPRQRSEAVNEKELIISNSGSLLSASLTSASGTGNVSQTKEESKTSKKFPSNNFPSNVRSLLSTGMLDGVPVKYMAWSREELRGIIKGSGLLMHEFERHAGRKTKHPNNHIYFENGKTIYGIVQELRSTPQNMLFDVIQTITGSPINQKSFRIWKESFLAATRELQRIYGKDELKQLS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1145 537 Pfam Chromo (CHRromatin Organisation MOdifier) domain 58 95 IPR023780 -
Lele06g1145 537 Gene3D - 50 99 - -
Lele06g1145 537 SUPERFAMILY Chromo domain-like 20 97 IPR016197 -
Lele06g1145 537 MobiDBLite consensus disorder prediction 386 410 - -
Lele06g1145 537 Pfam Tify domain binding domain 453 485 IPR032308 -
Lele06g1145 537 PANTHER AUTOIMMUNE REGULATOR 240 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1145 Lele-ChrLele06 7134211 7137318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1145 394 517 PHD Transcription Factor Family AT3G53680 47.101 5.25e-31 126