Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1140 ATGGAAAACTGCTCATCCCCTGCTTCTTATATCCGTTTGGTGCACCGTCTAATTGAGGAATGCATCCTATTCAACATGAGCGAGGAAGAGTGCATGGAAGCTCTTTCCAAACACGCCAATATCAAACCTGTAATTACCTCCACCGTGTGGAAGGAATTGGAGAAAGAGAATAAGGAGTTCTTCGAGACATACAAGAGAAACAGAGCAGGGAGGGTTTCAGAGACAGAGACAAGGGGAAGGATACACAACGTGGTTTCGGAATCTTCCTCTTCCTCCTCCTCCTCCTCGCACGGAGTTTAG 300 0.47 MENCSSPASYIRLVHRLIEECILFNMSEEECMEALSKHANIKPVITSTVWKELEKENKEFFETYKRNRAGRVSETETRGRIHNVVSESSSSSSSSSHGV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1140 99 Pfam Plant protein 1589 of unknown function (A_thal_3526) 14 65 IPR006476 -
Lele06g1140 99 MobiDBLite consensus disorder prediction 71 99 - -
Lele06g1140 99 MobiDBLite consensus disorder prediction 82 99 - -
Lele06g1140 99 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 11 65 IPR006476 -
Lele06g1140 99 PANTHER OS02G0137100 PROTEIN 5 67 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1140 Lele-ChrLele06 7079454 7080278 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1140 06 7079454 7080278 Lele13g1843 13 26395998 26397083 CCT
Lele06g1140 06 7079454 7080278 Lele14g1788 14 24786478 24787551 CCT
Lele06g1140 06 7079454 7080278 Lele15g0565 15 3339144 3340229 CCT
Lele06g1140 06 7079454 7080278 Lele16g0579 16 3255076 3256149 CCT
Lele16g0573 16 3230702 3231115 Lele06g1140 06 7079454 7080278 CCT
Lele06g1140 06 7079454 7080278 Lele08g1132 08 7089831 7090631 hybridization