Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1135 ATGGATCTCAAAAAAGCAGCCGTCCTCAACAGTACTCCCTCTGAACCCCCCACACCCACCACCCCTCGTCCCACTCTCTTCCTCTCCTCTTCCGGCAGGGCCCTCCTCGTTTCCAACTCCGGTAAATCCCTCCAGCTTTCCAATTCCAATAAATCCATTCTCTCCAATTCCGGCAAGCGTTTCGACAAGAAGAAGTACGTCAGGCAGGAGCTTCTGTCCCATGCCACCAGCGAGGCCCTTTCCTTGAAAAATCAATCCGGCTTCGATCCCTTACATATTGCTGCTAGCCATGGTCACCTAGGCATTGTTCAGGTGTTACTGGACCATGATCCGGGGCTAATAAATACATTTGGACAATCAAATGCAACTCCTCTCATATCTGCAGCTACAAAAGGGCATGCAGATGTTGTTGATCTTTTGTTATCACGAGATCCTAGACAGGTGGAGTTATCTAGGTCCAATGGAAAAAATGCGCTCCATTTTGCTTCCCGTCAGGGACATGCTTGTATTGTAAAATCATTACTCGAAAAGGATCCACAACTTACTCGAAGGAATGATAAGAAAGGGCAGATTCCGCTGCATATGGCTGTAAAGGGGGTTAGCTGTGAAGTAGTGAAGTTGCTTCTTAATGCGGATCCAGCAACTGTTGCACTGCCTGACAAGTTTAACAATACTGCATTACATATTGCCACCAGGAAGAAGAGGGCAGAGATAGTGAGTGAGCTATTGCTTCATTCTGAAATCAATGTCAATGCCCTAACAAGAGACCGTAAAACATCTCTTGACATTGCCGAAGGACTCCCTCCATCCGAGGAAATCCTAGATATAAGAGATTGCCTGGTTCGTAGCGGTGGAGTTAAAGCCAGTGATCTAATTAACCAACCGAGGGATGAGCTACGGAGGACTGTGACACAGATTAGGAAGGAGGTCCATATTCAGCTTGAACAAACTCGAAAGACAAACAAAAACGTGGATGGGATTGCCAAGGAGCTACGCAAGCTGCACAGAGCGGGGATCAACAATGCTACCAACTCAGTTACAGTGGTTGCTTCACTCTTTGCAACAGTTGCATTTTCTGCAGTGTTTGCAGTTCCTGGTGGGAATTCTGATAGTGGGGAGGCGGTTATGGTGACCACTCCACCTTTCAAGATCTTCTTTATTTCTAATGCAATTTCACTCTTTACATCACTGGTTGTTGTCGTGGTTCAGATCACAGTTGTTAGAGGGGAGACAAAGTCTGAAAGGAGGGTTGTGAGGGTGATTAATAAGCTGATGTGGGGGAGTTATGATGGCGGGTGTTCTTGGTGCTATGACATACTATGTGGTTAA 1329 0.4643 MDLKKAAVLNSTPSEPPTPTTPRPTLFLSSSGRALLVSNSGKSLQLSNSNKSILSNSGKRFDKKKYVRQELLSHATSEALSLKNQSGFDPLHIAASHGHLGIVQVLLDHDPGLINTFGQSNATPLISAATKGHADVVDLLLSRDPRQVELSRSNGKNALHFASRQGHACIVKSLLEKDPQLTRRNDKKGQIPLHMAVKGVSCEVVKLLLNADPATVALPDKFNNTALHIATRKKRAEIVSELLLHSEINVNALTRDRKTSLDIAEGLPPSEEILDIRDCLVRSGGVKASDLINQPRDELRRTVTQIRKEVHIQLEQTRKTNKNVDGIAKELRKLHRAGINNATNSVTVVASLFATVAFSAVFAVPGGNSDSGEAVMVTTPPFKIFFISNAISLFTSLVVVVVQITVVRGETKSERRVVRVINKLMWGSYDGGCSWCYDILCG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1135 442 ProSiteProfiles Ankyrin repeat profile. 86 109 IPR002110 GO:0005515
Lele06g1135 442 FunFam Ankyrin repeat-containing protein ITN1 147 267 - -
Lele06g1135 442 ProSiteProfiles Ankyrin repeat region circular profile. 154 186 - -
Lele06g1135 442 ProSiteProfiles Ankyrin repeat profile. 154 186 IPR002110 GO:0005515
Lele06g1135 442 Gene3D - 177 273 IPR036770 -
Lele06g1135 442 SMART ANK_2a 154 183 IPR002110 GO:0005515
Lele06g1135 442 SMART ANK_2a 86 116 IPR002110 GO:0005515
Lele06g1135 442 SMART ANK_2a 222 252 IPR002110 GO:0005515
Lele06g1135 442 SMART ANK_2a 188 218 IPR002110 GO:0005515
Lele06g1135 442 SMART ANK_2a 120 150 IPR002110 GO:0005515
Lele06g1135 442 MobiDBLite consensus disorder prediction 1 24 - -
Lele06g1135 442 ProSiteProfiles Ankyrin repeat region circular profile. 86 109 - -
Lele06g1135 442 Pfam Domain of unknown function 339 428 IPR026961 -
Lele06g1135 442 Pfam Ankyrin repeats (3 copies) 186 251 IPR002110 GO:0005515
Lele06g1135 442 Pfam Ankyrin repeats (3 copies) 81 142 IPR002110 GO:0005515
Lele06g1135 442 Gene3D - 56 176 IPR036770 -
Lele06g1135 442 SUPERFAMILY Ankyrin repeat 79 265 IPR036770 -
Lele06g1135 442 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 67 426 - -
Lele06g1135 442 ProSiteProfiles Ankyrin repeat profile. 222 255 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1135 Lele-ChrLele06 7048135 7050431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1135 67 426 Miscellaneous Gene Families AT3G09550 71.667 4.17e-180 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1135 06 7048135 7050431 Lele13g1834 13 26351165 26355208 CCT
Lele06g1135 06 7048135 7050431 Lele14g1779 14 24745002 24746664 CCT
Lele06g1135 06 7048135 7050431 Lele15g0570 15 3375531 3385372 CCT
Lele06g1135 06 7048135 7050431 Lele16g0588 16 3306002 3307135 CCT
Lele05g1271 05 7919670 7925390 Lele06g1135 06 7048135 7050431 ECH
Lele06g1135 06 7048135 7050431 Lele06g1135 06 7048135 7050431 ECH
Lele06g1135 06 7048135 7050431 Lele07g1319 07 7961694 7964416 hybridization
Lele06g1135 06 7048135 7050431 Lele08g1124 08 7052152 7058064 hybridization