Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1120 ATGGGTTGGATTCCCTGTTCTGGAAATTCAAACACGAAGAAGAAGACAAAGAAGCAGCCGAAGAAGATGAAGGTGCAGGAGAACATGGTTGATACGATAAAAGAAGCCCCAGGGAAGTTGAAGAGAAATTCATCTACAAATTCCAAGGATACCTCTAAAACTGGGAACTCTGACCACATAGCAGCACAGACTTTCACATTCCGTGAGTTGGCAACTGCAACAAAAAATTTTAGATCTGAATGCATGTTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTAATAATCAGGTTGTTGCAATTAAGCAACTTGACCGTAATGGGCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTGTTGATGTTGAGTCTACTACACCACCCTAACCTTGTCAGCCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGACATTTCTCCTGGTAAGAAATGTCTCGACTGGAATACAAGAATGAAAATAGCAGCTGGGGCGGCAAAAGGGTTGGAATATCTGCACGACAAAGCTAACCCTCCTGTCATATACCGAGATTTGAAGTGCTCAAACATTTTGCTCGGCAAAGGGTTTCATCCAAAGTTATCTGATTTTGGCTTGGCCAAACTTGGACCAGTAGGGGATAACACTCATGTGTCAACAAGGGTTATGGGCACCTACGGATATTGTGCTCCGGAGTATGCAATGACAGGACAACTGACTCTGAAATCAGATGTCTATAGCTTCGGTGTGGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAATTCAAAGGCTGCTGGAGAACAGAATCTAGTTGCATGGGTGAGACCTTTGTTTAAAGATCGACAAAAATTTTCACAAATGGCGGATCCAATGCTCCAAGGTCAGTATCCTTCGAGAGGCTTATACCAGGCCCTTGCAGTTGCTGCTATGTGTGTTCAAGAGCAGGCTAACATGCGTCCGGTTATAGCCGATGTAGTCACAGCTTTGACTTACCTTGCTTCACAAAGATACGACCCGAATTCACAGTCGCTCCAAAGCTCTCGCCTTTCCCCGGCCACTTCTAGAACCAGGAGGGGACAGTGA 1149 0.4413 MGWIPCSGNSNTKKKTKKQPKKMKVQENMVDTIKEAPGKLKRNSSTNSKDTSKTGNSDHIAAQTFTFRELATATKNFRSECMLGEGGFGRVYKGRLESNNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPGKKCLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGKGFHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWVRPLFKDRQKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALTYLASQRYDPNSQSLQSSRLSPATSRTRRGQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1120 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele06g1120 382 PANTHER OS07G0668900 PROTEIN 18 364 - -
Lele06g1120 382 MobiDBLite consensus disorder prediction 363 382 - -
Lele06g1120 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lele06g1120 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1120 382 Gene3D Transferase(Phosphotransferase) domain 1 154 374 - -
Lele06g1120 382 CDD STKc_IRAK 83 352 - -
Lele06g1120 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Lele06g1120 382 MobiDBLite consensus disorder prediction 22 38 - -
Lele06g1120 382 MobiDBLite consensus disorder prediction 39 57 - -
Lele06g1120 382 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Lele06g1120 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1120 382 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
Lele06g1120 382 MobiDBLite consensus disorder prediction 1 57 - -
Lele06g1120 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Lele06g1120 382 Pfam Protein tyrosine and serine/threonine kinase 81 350 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1120 Lele-ChrLele06 6968959 6971769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1120 32 356 Glycoside Hydrolase AT3G07070 68.000 3.09e-167 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele06g1120 PK_Tyr_Ser-Thr 3.2e-46 CL0016