Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1119 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTCTTGCAAAACCAGTAGCTTCAAGGCCTACGTGCCCACCTTTTAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCCTCTCCATCTATTGAATCTTCTCAAGCCACAGTTTCAGCCATTAGACCAAAGACTGTGAGGTTCAAGCCAGCCATGAATCGACTGCCTCCTGCCGGATTTATTTCTTCCGGGGCTAAACCATCTTACAAAAGTCATAAACCAGACACTAATCAAACAGTTGTTTACAAGCCTACGGCTAAGCTTGTCTCCAAGGCCACTGTTTCTCTTCTGGCAAATATGGGAAATTATAGTACCAGCCATAGCCAGCCGTTTCAACATCCAAATCAGGAGAATCCGAGGACCAATTTGATCTCAATGAATCATCAGAACAAGAACACCCCACGTGCTGAATCAAATCTGGCAGTTGAATGTTTCAAGATGGTACAGCAGAGCCCAGAAGAGGACCAGAAAACTTCACCATCTACTAGTAATGGTGGTGATAGACCTTGTTATGATGGGTATAACTGGAGGAAATATGGTCAGAAGCAAGTAAAAGGAAGCGAGTATCCGAGGAGTTATTACAAATGCACGCATCCTAATTGCCCAGTGAAGAAGAAAGTTGAAAGATCACTTGATGGGCAGATTGCAGAAATTGTGTATAAAGGGGAACACAACCATTCAAAGCCTCATCCTCCTAAGCGCAACTCAACAGGAGGAACACAGGGATCAGGAATCGTGCCTGATGGATTTAATCAAGATACTAGTTGTAATAACAACCATTTATGGGGTAATCCTAACAATGAGAGGAATGAAAATAGAATAGAGAGCCAGAGTGAGGCAGGTTATCTTGTCAAAGCTGGAGGAAGCCCTGAGAATTCATGTGCTCAAAGTGAGGAATGTGAGGAAGGAAACAAGGGAAATGATGTGGAGGAAGATGACAAACCAAAAAGTAAAAGAAGGAAAAAAGAGAATAAATCCAATGAAGTAGCAGTAGCAGTAGCAGAGGAAGGTTTAGTGGAGCCTCAAGTGGTGGTTCAGAGTTCTACAGATTCTGAAGTACTCGGAGACGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTATTACAGATGCACTAACATAAAGTGCAGTGCCCGGAAACATGTGGAAAGATCAATAGATGATCCAAAAGCATTTATCACTACATACGAAGGGAAACACAACCATGAGATGCCACGCAAAACTATAGGTTCTGTGGCCTCTGGAAACGTCAAGTCATGA 1317 0.4343 MDVKEAERVVLAKPVASRPTCPPFRSFSELLAGAINASPSIESSQATVSAIRPKTVRFKPAMNRLPPAGFISSGAKPSYKSHKPDTNQTVVYKPTAKLVSKATVSLLANMGNYSTSHSQPFQHPNQENPRTNLISMNHQNKNTPRAESNLAVECFKMVQQSPEEDQKTSPSTSNGGDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSLDGQIAEIVYKGEHNHSKPHPPKRNSTGGTQGSGIVPDGFNQDTSCNNNHLWGNPNNERNENRIESQSEAGYLVKAGGSPENSCAQSEECEEGNKGNDVEEDDKPKSKRRKKENKSNEVAVAVAEEGLVEPQVVVQSSTDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCSARKHVERSIDDPKAFITTYEGKHNHEMPRKTIGSVASGNVKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1119 438 MobiDBLite consensus disorder prediction 158 185 - -
Lele06g1119 438 MobiDBLite consensus disorder prediction 242 281 - -
Lele06g1119 438 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 MobiDBLite consensus disorder prediction 231 281 - -
Lele06g1119 438 MobiDBLite consensus disorder prediction 161 178 - -
Lele06g1119 438 FunFam WRKY transcription factor 352 425 - -
Lele06g1119 438 MobiDBLite consensus disorder prediction 294 337 - -
Lele06g1119 438 MobiDBLite consensus disorder prediction 67 87 - -
Lele06g1119 438 FunFam WRKY transcription factor 165 240 - -
Lele06g1119 438 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 MobiDBLite consensus disorder prediction 311 337 - -
Lele06g1119 438 Gene3D WRKY domain 154 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 Gene3D WRKY domain 349 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 SUPERFAMILY WRKY DNA-binding domain 358 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 MobiDBLite consensus disorder prediction 417 438 - -
Lele06g1119 438 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 Pfam WRKY DNA -binding domain 366 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g1119 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 117 426 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1119 Lele-ChrLele06 6963173 6964876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1119 356 434 WRKY Transcription Factor Family AT2G37260 46.429 5.45e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele06g1119 WRKY 1.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1119 06 6963173 6964876 Lele13g1811 13 26216577 26218787 CCT
Lele06g1119 06 6963173 6964876 Lele14g1753 14 24604041 24607574 CCT
Lele06g1119 06 6963173 6964876 Lele15g0597 15 3513599 3515784 CCT
Lele06g1119 06 6963173 6964876 Lele16g0611 16 3439581 3441773 CCT
Lele06g1119 06 6963173 6964876 Lele07g1300 07 7881151 7882814 hybridization
Lele06g1119 06 6963173 6964876 Lele08g1107 08 6971772 6973472 hybridization