Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1110 ATGGCCGCCGCAGCTCGGCCTCTCGTCACCGTCCAATCCCTCGAGGGTGACATGGCCACAGATGCTGATACAACTGTTCATTTTCCTGATGTCATGAAGGCTGCCATTCGCCCAGACATTGTCAACTTCGTTCATGCCAACATTTCTAAGAACAGTCGCCAGCCCTATGCCGTCAGCAAGCGTACCGGTCACCAGACCTCCGCCGAATCATGGGGTACTGGCCGTGCTGTGTCTCGTGTCCCGCGTGTCCCTGGTGGCGGTACCCACCGTGCTGGTCAGGGTGCTTTTGGTAATGTGTCGTGGTGGTCTCTGTGCCGGAAATGCCTCGTGGTTAGCGACTCAACTGAGGCTGTTGAGAAGACTAAGGATGCTATCAAGGTGATGAAGCAGATCGGCGCTTTTCCTGATGCCGAGAAAGCAAAGGACAGCCATTCTATCAGACCTGGGGTCGAGGTTGCTAATGTCGAGAGGCTCAACCTTCTCAAGTTAGCTTCTGGTGGTCATCTGGGCAGGTTTGTTATTTGGACTAAGTCTGCTTTTGAGAAACTTGATTCGATTTATGGGTCGTTCGACAAGGCTTCAGAGAAGAAGAAAGGGTACTCTCTCCCAAGGGCCAAGATGGTTAATAGTGACTTGGCTAGGATTATCAACTCTGATGAGATTCAATCCGTTGTGAGACCCATCAAGAAGGAAATTAAGAGGGCACCACTCAAGAAGAACCCGCTTAAGAACCTGAATGCTATGTTGAAACTGAACCCATATCATAAGACTGCTAAGAGAATGGCTCTTCTTGCTGAGGCTCAAAGGGTTAAAGCAAAGAAAGAGAAGCTTGATAAGATGAGGAGTTCTATCTCTAAGGTGCGATATTATTATTTTCTTGCGTCAGAGGAGGCCTCTGCTATTAAGGCTGCAGGAAAAGCGTGGTATCAAACCATGGTGTCGGACTCTGATTATGCAGAATTTGAGAACTTTTCAAAGTGTTTTGAGAATGCAATTACTAGTTATCATCGGGAGTAA 1017 0.4828 MAAAARPLVTVQSLEGDMATDADTTVHFPDVMKAAIRPDIVNFVHANISKNSRQPYAVSKRTGHQTSAESWGTGRAVSRVPRVPGGGTHRAGQGAFGNVSWWSLCRKCLVVSDSTEAVEKTKDAIKVMKQIGAFPDAEKAKDSHSIRPGVEVANVERLNLLKLASGGHLGRFVIWTKSAFEKLDSIYGSFDKASEKKKGYSLPRAKMVNSDLARIINSDEIQSVVRPIKKEIKRAPLKKNPLKNLNAMLKLNPYHKTAKRMALLAEAQRVKAKKEKLDKMRSSISKVRYYYFLASEEASAIKAAGKAWYQTMVSDSDYAEFENFSKCFENAITSYHRE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1110 338 MobiDBLite consensus disorder prediction 55 73 - -
Lele06g1110 338 Gene3D - 1 102 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lele06g1110 338 Gene3D - 103 148 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lele06g1110 338 Gene3D - 149 226 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lele06g1110 338 MobiDBLite consensus disorder prediction 55 78 - -
Lele06g1110 338 Pfam Ribosomal protein L4/L1 family 29 99 IPR002136 GO:0003735|GO:0005840|GO:0006412
Lele06g1110 338 Pfam Ribosomal protein L4/L1 family 111 184 IPR002136 GO:0003735|GO:0005840|GO:0006412
Lele06g1110 338 SUPERFAMILY Ribosomal protein L4 9 185 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lele06g1110 338 PANTHER 60S RIBOSOMAL PROTEIN L4 109 150 IPR045240 -
Lele06g1110 338 Coils Coil 260 280 - -
Lele06g1110 338 Pfam 60S ribosomal protein L4 C-terminal domain 198 270 IPR025755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1110 Lele-ChrLele06 6915680 6917632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1110 2 328 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 61.369 2.23e-158 447