Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1109 ATGTTGGATCTTAATCTCAACGTCGTTTCCTCTGATTCCGCGTCGGATTCCGTCGACGTGCCTGCCGAGAATGTTGTGCTACTTTCTGGTAGCCAAATGGATAGCTCTGGAAGCTTTAATTCTTCCATCGTCAATGCCGATGCCTCCACCAATACTTTTGATGAAGACTCTTGCTCTTATGGTGATGCCTTTGCTACCAACTTTGGAACAGTGAAGAAGAATAACACAGATGATGGCACAACCTACAAATCAGTTGATCTTCCAGTAGGCGAAGGTGAAGATGCCTGTGATCGGACCATGCCGCTTTTTCCGATCGCCGGTGCCAAAGAGGGTCGCGTCACTGAATTGGGAATCGGTCAGCGATTTCCAGGTTCGTCTTCAAGTAAGGGATGGTTGGATTTCCTGTGCAAGGAGGTGGGTCCAGGTGGAACGCCGGAACAGAGGATGCCGCCGCCGCCACAGCAGAAACCGCAGGTTAAGAAGAGTCGGCGGGGACCGAGGTCACGGAGCTCACAGTATCGCGGTGTTACATTTTATCGAAGAACTGGAAGATGGGAATCGCATATATGGGATTGTGGAAAACAAGTGTACTTGGGCGGATTTGATGCAGCACATGCTGCGGCAAGGGCATATGATCGAGCTGCAATCAAGTTCCGTGGCCTTGATGCTGATATTAATTTCAATGTTAGTGATTATGAGGAGGATATAAAGCGGATGAGTAATTTCACAAAGGAAGAGTTTGTGCATATTCTGCGGCGACGGAGCACTGGCTTTTCCAGGGGAAGCTCTAAATATAGAGGAGTTACTCTGCATAAATGTGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGTATATATATCTCGGGCTATTTGATAGCGAAATAGAGGCTGCAAGGGCGTATGATAAAGCGGCTATAAAATGCAATAGGAGGGAAGCAATGACAAACTTTGAGCCAAGCTCATACGAAGGAGAGATAATCTCTCAGGCACATAATGAAGATCGCAACCCAAATCTTGATCTTAGCTTGGCCATTGCCCCCCCTGCTTACTCTGATGGTTTTCAAGTCCAACATGGCTGGGCCAATCTTCCTGTTGATGGGAGAGTTGTGTTCGAGAACTCTGCATCAAGGTTATTGAAGGGTCAACCGTCTCATGTTTTCCCGATTGCACCCCAGCATCCTTCTGCCTGGAATAGTACTGATTTCTTTCCCATAAATCAGGAAAGAGCAATGGAGAAAAGAATGGAAGCTAATTCCCTGCCAAACTGGGTATTTCAATACCAAGGCCCATATGGCGAGGCAGCTTTGATTCCGTCTTTCTCTGCCGCAGCATCATCAGGATTCCCTTCAACAAGGTTACCACCACCACCAGCAGCTGGTAGTCAGATTCATTTTCCAAACATGACGATCCATCCTTAG 1428 0.4769 MLDLNLNVVSSDSASDSVDVPAENVVLLSGSQMDSSGSFNSSIVNADASTNTFDEDSCSYGDAFATNFGTVKKNNTDDGTTYKSVDLPVGEGEDACDRTMPLFPIAGAKEGRVTELGIGQRFPGSSSSKGWLDFLCKEVGPGGTPEQRMPPPPQQKPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDAAHAAARAYDRAAIKFRGLDADINFNVSDYEEDIKRMSNFTKEEFVHILRRRSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNRREAMTNFEPSSYEGEIISQAHNEDRNPNLDLSLAIAPPAYSDGFQVQHGWANLPVDGRVVFENSASRLLKGQPSHVFPIAPQHPSAWNSTDFFPINQERAMEKRMEANSLPNWVFQYQGPYGEAALIPSFSAAASSGFPSTRLPPPPAAGSQIHFPNMTIHP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1109 475 MobiDBLite consensus disorder prediction 140 173 - -
Lele06g1109 475 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Lele06g1109 475 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Lele06g1109 475 Pfam AP2 domain 263 310 IPR001471 GO:0003700|GO:0006355
Lele06g1109 475 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Lele06g1109 475 SUPERFAMILY DNA-binding domain 171 230 IPR016177 GO:0003677
Lele06g1109 475 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Lele06g1109 475 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
Lele06g1109 475 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Lele06g1109 475 SUPERFAMILY DNA-binding domain 263 322 IPR016177 GO:0003677
Lele06g1109 475 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Lele06g1109 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 145 342 - -
Lele06g1109 475 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
Lele06g1109 475 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1109 Lele-ChrLele06 6909905 6912504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1109 159 347 AP2-EREBP Transcription Factor Family AT4G36920 78.646 5.30e-91 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele06g1109 AP2 2e-09 CL0081