Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1097 ATGTTCACTGGTTCTGGTTTTTATGCCTCCCGCAGGATCAAATCGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAAAGGAAGATCAGAAATCAAGCAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGATCTCCTCAGACTCATACGTGGGTTCTGAGAAAACAGCACGCTCCTCTGCTCCTCCACCTGAAGAAAATAAATCATATGATGTTGAGAATGAAGCCAGTCAAAGTCATGTTCATCAAGTTGCAACTTCTGTGGATTCTGAGGGACCAATCCCTGCTGTTCAGACACCAGTTGTTCCAATTCAAGCCCCTAAAATCTCTCGGTTTGCCGGTAAATCAAGGGAAGAGGTGGCTGCAATAAAAATTCAGACAACTTTTAGGGGATATCTGGCAAGAAGAGCTTTGCGAGCTCTAAGAGGGCTGGTGAGATTGAGGACACTAATAGAAGGGCCAATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAACTTTGGCTCGTGTGCAATCCCAGATTCGTTCTAGAAGGATCAGGATGTTCGAGGAGAATCAGGCTCTGCAAAGGCAGCTCTTACACAAGCATGCAAAAGAGCTCGAAAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAGATTGAAGCCAAGTCACTGCAAAAGTATGAGGCAGCCATGAGAAGAGAAAAAGCGCTGGCTTATGCATTCACTCATCAGCAAAGATGGAAGAATTCATCCAGATCGATAAACCCAATGTTCATGGATCCAACGAATCCTTCATGGGGTTGGAGCTGGCTGGAACGATGGATGGCAGCTCGGACATTGGAGAGCCGAAGCACAATGGAAAAAGAAATGAACGATGATCGTTCATCTGTGAGAAGTTGTTGCCGCAGCATCGCTGGTGGAGAAATCAGCAAATCATATGCTCGTCACCAACTCATTTCTGAGAAGCATTCTCCAACACCAAGCCAAATCCCAGATTCACCTAGCTTCCAATCATATTCTACACCTTCAAAGCCAGCTTCTAGAAAACTCAAGAAGGCCAACCCAAAGGACAGCTTTGTCATGGATGATGACATTAAAAGTGTGGCCAGTGCGCAGTCAGCACGGTTCCGGCGGCACTCCATTGGTGGCGCGTCGGTGAGAGACGACGAGAGCCTTGCGAGCTCGCCGGCGGTTCCGAGTTATATGGTGGCGACTCAGTCTGCAAAAGGCAAGTCTAGGACGCAGAGTCCATTGGCACCTGAGAATGGCACGCCACAGAAAGAGAAAGGGTCTTTCGGGACAGCAAAGAAACGGCTTTCTTACCCGCCGTCACCGGCGAGGCCGTGGCGGCATTCAAGTGGGCCACCAAAGGTAGAAAACAACTTAAATGCAGAAATCACTATGGGAAATGGTGGGGCTGCTTAA 1491 0.4755 MFTGSGFYASRRIKSRNAKKMGRKGNWFSSVKKAFSPESKKKEKEDQKSSKSKKKWFGKQKLEISSDSYVGSEKTARSSAPPPEENKSYDVENEASQSHVHQVATSVDSEGPIPAVQTPVVPIQAPKISRFAGKSREEVAAIKIQTTFRGYLARRALRALRGLVRLRTLIEGPIVKRQATSTLRSMQTLARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIGEEWDDSLQSKEQIEAKSLQKYEAAMRREKALAYAFTHQQRWKNSSRSINPMFMDPTNPSWGWSWLERWMAARTLESRSTMEKEMNDDRSSVRSCCRSIAGGEISKSYARHQLISEKHSPTPSQIPDSPSFQSYSTPSKPASRKLKKANPKDSFVMDDDIKSVASAQSARFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKGKSRTQSPLAPENGTPQKEKGSFGTAKKRLSYPPSPARPWRHSSGPPKVENNLNAEITMGNGGAA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1097 496 PANTHER IQ-DOMAIN 5-RELATED 21 466 - -
Lele06g1097 496 MobiDBLite consensus disorder prediction 1 104 - -
Lele06g1097 496 SMART iq_5 136 158 IPR000048 GO:0005515
Lele06g1097 496 ProSiteProfiles IQ motif profile. 137 165 IPR000048 GO:0005515
Lele06g1097 496 MobiDBLite consensus disorder prediction 425 496 - -
Lele06g1097 496 MobiDBLite consensus disorder prediction 65 82 - -
Lele06g1097 496 Pfam IQ calmodulin-binding motif 140 158 IPR000048 GO:0005515
Lele06g1097 496 MobiDBLite consensus disorder prediction 342 380 - -
Lele06g1097 496 MobiDBLite consensus disorder prediction 342 369 - -
Lele06g1097 496 MobiDBLite consensus disorder prediction 35 61 - -
Lele06g1097 496 Pfam Protein of unknown function (DUF4005) 411 477 IPR025064 -
Lele06g1097 496 MobiDBLite consensus disorder prediction 425 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1097 Lele-ChrLele06 6822036 6826112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1097 21 496 IQD Protein Family AT5G03040 51.417 2.02e-142 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1097 06 6822036 6826112 Lele14g1743 14 24546908 24553098 CCT
Lele06g1097 06 6822036 6826112 Lele15g0610 15 3574850 3576806 CCT
Lele06g1097 06 6822036 6826112 Lele16g0622 16 3483575 3491295 CCT
Lele06g1097 06 6822036 6826112 Lele06g1097 06 6822036 6826112 ECH
Lele06g1097 06 6822036 6826112 Lele07g1278 07 7740589 7743343 hybridization
Lele06g1097 06 6822036 6826112 Lele08g1084 08 6840740 6842545 hybridization