Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1085 ATGAGCGTCATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTATGACAAATACGACGTCGACAAGCTCAAGGATTCCAATATCTCCGGCGATGATGCCTTTGCTCGACTCTACGCTGTAGTTGAATCCGACATCGAGGCAGCTCTTGAGAAAGCAGAAACTTCTTCCAAGGATAAAAGTAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACTAAGGCTTGTTTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTGAAGAAGGTAAAAGGGCTTTCACCAGAAGAATTTGCTGCTCGTAATGATTTGGTTCTTGCACTGCCAGAGAGGATCCAAGCTATCCCGGAAGGGACCCCTGCTGCACCCAAAAAAACAGGAGGTTGGGCTGCTTCAGCTTCCCGTACTGAAATTAGGTTTGATTCAGATGGTCAATTTGATGATGAATACTTCCAACAAACTGAGGAATCAAGTAAATTTCGGCAAGAGTTTGAAATGCGTAAACTGAAGCAGGATCAAGGTTTGGATATGATTGCAGAAGGCTTGGATACATTGAAAAACATGGCACACGATATGAATGAGGAACTAGATAGACAAGTTCCATTGATGGATGAGATTGACGCTAAGGTGGACAAAGCATCATCTGACCTAAAGAATACCAATGTCAGGCTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAATTTCTGTATTGACATTGTGCTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAAATTTGGCGTTGATATTCTTTCTTGTCTTGAGCAATACTTGTACAAAGTACTAGCACATTGTTTACATAAAGGACTTTGCATCGGGATTATATTCTTGAATTCTGTACCAGTATTCAATTTCACTCGGGAGGCAGAAAGAGTAATGAGCGGTGGTGGTGAGAAGGAATCGGAGGGGTTGAAGGAGAACGTTCAAGCAACACCTACTCGAAGGGTGTTCCCTTTGTCTTACAAAGAGAAACTTCTTTCATTGGGATGCGGTGGTTACCTGGTTAAACATGATGAAACGGAAGATATTGGGAAGGATGGAGATCATTTTTTTATTAAGAAACACCAAGGGGCTGAATCTAGCGGTGAAAAGGAGACCACGGATGGAGTCGAGACAGAAGGAACTACTATCAAGCCAAGATACCCTGAACAAAACATATGA 1209 0.4285 MSVIDILTRVDSICKKYDKYDVDKLKDSNISGDDAFARLYAVVESDIEAALEKAETSSKDKSRASVVAINAEIRRTKACLLEEVPKLQRLAVKKVKGLSPEEFAARNDLVLALPERIQAIPEGTPAAPKKTGGWAASASRTEIRFDSDGQFDDEYFQQTEESSKFRQEFEMRKLKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYKFGVDILSCLEQYLYKVLAHCLHKGLCIGIIFLNSVPVFNFTREAERVMSGGGEKESEGLKENVQATPTRRVFPLSYKEKLLSLGCGGYLVKHDETEDIGKDGDHFFIKKHQGAESSGEKETTDGVETEGTTIKPRYPEQNI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1085 402 FunFam Putative syntaxin-71-like 170 231 - -
Lele06g1085 402 SMART tSNARE_6 165 232 IPR000727 -
Lele06g1085 402 CDD SNARE_Qc 175 230 - -
Lele06g1085 402 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele06g1085 402 Pfam SNARE domain 207 256 IPR000727 -
Lele06g1085 402 SUPERFAMILY SNARE fusion complex 165 230 - -
Lele06g1085 402 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Lele06g1085 402 PANTHER SYNTAXIN 45 252 IPR045242 -
Lele06g1085 402 MobiDBLite consensus disorder prediction 370 402 - -
Lele06g1085 402 Gene3D - 170 231 - -
Lele06g1085 402 MobiDBLite consensus disorder prediction 370 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1085 Lele-ChrLele06 6769111 6772743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1085 1 260 SNARE and Associated Proteins AT3G09740 77.481 1.74e-148 419