Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1076 ATGGCCAAAGACCTCGAGGGAGCCGCTCCTCACCCTCACAAGGACTACCATGACCCCCCTCCCTCTCCTCTCTTCGACGCCACCGAGCTCCGCAAGTGGTCCTTCTACAGGGCCGTCATTGCCGAGTTCGTCGCCACCCTCCTCTTCCTCTACATCACCGTCTTGACCGTTATTGGTTACAAGAGCCAGATCGACCCCGCCCATAAGGGAACCGCCTGCGACGGCGTCGGCATTCTCGGCATCGCCTGGGCCTTTGGCGGCATGATTTTCGTCCTCGTCTACTGCACCGCTGGCATTTCTGGAGGACACATAAACCCGGCCGTGACGTTTGGGTTGTTCCTAGCGAGGAAGGTGTCGCTGATTAGAGCGATTATGTACATGGTGGCTCAGTGCCTGGGAGCCATATGTGGTTGTGGCTTGGTCAAGGCATTCCAGAAGGCCTACTACAACAGGTATCAGGGTGGAACCAACATGTTGTCTTCTGGCTACAGCAAAGGCACCGGTTTGGGTGCTGAGATTATTGGTACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAATGCCAGAGACTCTCATGTTCCCGTGTTGGCTCCTCTTCCAATTGGATTCGCGGTGTTCATGGTTCACCTGGCCACCATCCCCATCACCGGCACCGGCATCAACCCGGCCAGAAGCTTTGGGGCCGCGGTCATGTACAACAATCAGACGGCATGGGATGACCACTGGCTATTCTGGGTCGGTCCCTTCATTGGCGCCGCCATCGCTGCAATTTACCACCAATACGTGTTGAGAGCTCAAGCGGCGAAGGCTCTGGGATCTTTCAGGAGCGGCTCCAATTTGTAA 858 0.5664 MAKDLEGAAPHPHKDYHDPPPSPLFDATELRKWSFYRAVIAEFVATLLFLYITVLTVIGYKSQIDPAHKGTACDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGCGLVKAFQKAYYNRYQGGTNMLSSGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYNNQTAWDDHWLFWVGPFIGAAIAAIYHQYVLRAQAAKALGSFRSGSNL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1076 285 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Lele06g1076 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 273 IPR034294 -
Lele06g1076 285 FunFam Probable aquaporin PIP1-2 22 283 - -
Lele06g1076 285 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 TIGRFAM MIP: MIP family channel proteins 41 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 Gene3D Glycerol uptake facilitator protein. 22 285 IPR023271 -
Lele06g1076 285 SUPERFAMILY Aquaporin-like 29 269 IPR023271 -
Lele06g1076 285 CDD MIP 37 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1076 285 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g1076 285 Pfam Major intrinsic protein 29 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1076 Lele-ChrLele06 6708874 6710037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1076 1 285 Major Intrinsic Protein MIP AT2G37170 81.053 1.53e-173 481