Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1069 ATGGACGAGAGGGTGCTAGATGCAATATGTGAAAGACTGAAACCTTGTCTATGTGTTCAAGGAACGCTCCTAGTTCGCGAAGGAGATCCCGTGACTAAAATGCGCTTTATCATTCGAGGACGTCTAGATTCTTATACCACAAATGGTGGAAGAACCGGGTTCTTCAATTGTTGTAGAATCGGACCAGGTGATTTCTGTGGCGAGGAGCTATTGCCATGGGCTCTGGACCCATGTCCAAGCGCAGTCCTTCCTTCATCAACTCGCACAGTGAAAGCCCTAACAGAAGTGGAAGCTTTCGCGCTCGTAGACGAAGACTTGAAATTTGTGGCGGCTCAGTTCAGGAGGCTACACAGCAAGCAACTGAGGCACACGTTCAGGTTTCACTCGCATCAATGGAGGGCATGGGCTGCTTGCTTCATACAAGCGGCTTGGTTTAGATACAAGAGAAGAAAGGAGGCGAGTGAGCTAAATCATAAGGAGGATGCTAGGGAAACAATGGTGGAACATTTCTCTGCGCCTTTGTACTTGCAACCTCGAATGGGTTCGGGTGTTACGATGTATAAAGCGGCCAACTTGGTATGTAGCCCGAGGAAAGGTGGAAGCCTGCGATATGGTTCTGAACTAGATATTATTGGTTCACTCACCAGGAAGCCCCTTGAACCTGATTTCAGTACTGTTGAAGATTGA 687 0.4803 MDERVLDAICERLKPCLCVQGTLLVREGDPVTKMRFIIRGRLDSYTTNGGRTGFFNCCRIGPGDFCGEELLPWALDPCPSAVLPSSTRTVKALTEVEAFALVDEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRAWAACFIQAAWFRYKRRKEASELNHKEDARETMVEHFSAPLYLQPRMGSGVTMYKAANLVCSPRKGGSLRYGSELDIIGSLTRKPLEPDFSTVED 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1069 228 Gene3D Jelly Rolls 1 115 IPR014710 -
Lele06g1069 228 Pfam Cyclic nucleotide-binding domain 20 107 IPR000595 -
Lele06g1069 228 SUPERFAMILY cAMP-binding domain-like 1 115 IPR018490 -
Lele06g1069 228 FunFam Cyclic nucleotide-gated ion channel 1 1 113 - -
Lele06g1069 228 SMART cnmp_10 1 128 IPR000595 -
Lele06g1069 228 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 180 - -
Lele06g1069 228 CDD CAP_ED 1 128 IPR000595 -
Lele06g1069 228 ProSiteProfiles cAMP/cGMP binding motif profile. 1 101 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1069 Lele-ChrLele06 6656110 6656796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1069 1 225 Ion Channels AT2G28260 61.778 6.43e-88 270