Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1068 ATGCCTACGGTTGGTTCTTACCTAAGTCCTTGTCATCACTTAATGTTCTCAAGTCAAGTGATAAGTCTCGAAGGCAAATCTGATATGAAGCAGAGTTCTGATGCCCTGAGCTTGACGTTAACCATAAGTTATCTACATGCCTTACCAAGCACGAAACATGATCCAATTGTATGGAAGTTGCACCACGTTCGGTCAGTTCCTTTTTCAGGTGGTCTTCCTCTTCCTAATTCTCTTATTCCGGCGGAACAACCACAGAATCTGAGTCCGAGGAACGATCCTATATCGAATTTGAATCTTACAATGAAGTCCACAAAGAGACGACGTTGTGAAATTCAGAGGTTTCAGTGGAGCGCTGTGGGTTCTGGTAGATCAAAATCTGTAAGGTTTCAGGATAATCTTGAGAAAGATATATTGATGGATAGCATAGAAAGTCCCATGTCGAGGAAGCCAGATTACAAGATGAATGCGAGAAACATGTTGATGCAGAGAAAGAAACTTTCAAGGGTGTTTTCTGAGGATTATGATGCGTCGAAAAGGAAGATATTCGATCCAAGGGGACCGACAGTAAACAGATGGAACAAGATGTTCTTAGTAGCATGTCTGATTTCACTATTTGTGGATCCCTTCTTCTTCTACTTGCAAGAGGCTAAGAAAGACAAGTGCATTGCTATATCTGCTGGGCTCGGAGTTTCCCTCACCACAATTCGGTCCATGATTGATGCATTTTACATCATTCATATATTCATTCGGTTTCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGCTAGAGGAGAGTTAGTTATAGACCCTTCAAAGATTGCATCAAGGTACCTCCGAAAAGACTTCTGGCTTGATCTTCTTGCTGCCCTCCCTCTTCCCCAGGTGTTGATTACAGCTGTAATTCCAAATCTAAGGAACTCACAAATGATGGCTTCAAGGCAGAGTCTGCGCCTTGTGATCATTGTCCAGTACCTATTGAGGTTATATCATATCTTCCCCCTTTCATCCGAAATAGTCAAGGCAAATGGAGTAATGATGGAAAAAGCCTGGGCTGGGGCAGCTTATAACCTTATGCTCTACATGCTAGCAAGTCATGTCTTAGGATCCTCCTGGTACCTGTTGGCAATCGAAAGGCAGGATGAATGTTGGAAAAAAGCTTGTAATCTTGAGTTCCCATATTGTCAATACCGTTATCTTGATTGTCAAAGTATAAGTGATCCAGCTAGAGCAGCTTGGTTTAGATCAAGCAACCTGTCAACTTTATGTGATAAGAACAGTGATTTCTTTCAGTTTGGTATTTTTGCCGATGCTCTCACTTTGGAAATGGCAAACTCAAAGTTCTCAAGCCGATATTATTATTGCCTGTGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCCTAACCAGCACTAACGTTGGAGAAATAAATTTTGCTATCATTATTGCAATTCTTGGTTTGGTGCTTTTTGCACTTCTGATAGGAAATATGCAAACGTACCTGCAATCAACTACTTTAAGACTGGAAGAGTGGAGAATAAGACGCACAGATACAGAACGATGGATGCATCATAGGCAGTTACCTCATTACTTGAAGCAAAGTGTGAGACGCTATGAGCAATTCAGATGGGTTGCCACGAGAGGAGTTGACGAGGAATCCATCCTTCGAGACCTCCCTGTCGATATCAGACGCGACATCAAACGCCACCTGTGTCTAAACCTCGTCCGACAAGTGGGTCTTCATCTTCAATTCCTTGTCGCTTCCAGATTTCCCTTCATCGTATAA 1797 0.4263 MPTVGSYLSPCHHLMFSSQVISLEGKSDMKQSSDALSLTLTISYLHALPSTKHDPIVWKLHHVRSVPFSGGLPLPNSLIPAEQPQNLSPRNDPISNLNLTMKSTKRRRCEIQRFQWSAVGSGRSKSVRFQDNLEKDILMDSIESPMSRKPDYKMNARNMLMQRKKLSRVFSEDYDASKRKIFDPRGPTVNRWNKMFLVACLISLFVDPFFFYLQEAKKDKCIAISAGLGVSLTTIRSMIDAFYIIHIFIRFQTAYVAPSSRVFARGELVIDPSKIASRYLRKDFWLDLLAALPLPQVLITAVIPNLRNSQMMASRQSLRLVIIVQYLLRLYHIFPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLAIERQDECWKKACNLEFPYCQYRYLDCQSISDPARAAWFRSSNLSTLCDKNSDFFQFGIFADALTLEMANSKFSSRYYYCLWWGLRNLSSLGQNLLTSTNVGEINFAIIIAILGLVLFALLIGNMQTYLQSTTLRLEEWRIRRTDTERWMHHRQLPHYLKQSVRRYEQFRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVGLHLQFLVASRFPFIV 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1068 598 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 165 583 - -
Lele06g1068 598 Gene3D - 194 508 - -
Lele06g1068 598 SUPERFAMILY cAMP-binding domain-like 514 584 IPR018490 -
Lele06g1068 598 Gene3D Helix hairpin bin 512 575 - -
Lele06g1068 598 Pfam Ion transport protein 192 511 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele06g1068 598 PRINTS EAG/ELK/ERG potassium channel family signature 247 256 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1068 598 PRINTS EAG/ELK/ERG potassium channel family signature 364 374 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1068 598 PRINTS EAG/ELK/ERG potassium channel family signature 547 554 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1068 598 PRINTS EAG/ELK/ERG potassium channel family signature 497 506 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1068 598 PRINTS EAG/ELK/ERG potassium channel family signature 453 470 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1068 598 PRINTS EAG/ELK/ERG potassium channel family signature 479 490 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1068 598 FunFam Cyclic nucleotide-gated ion channel 1 511 575 - -
Lele06g1068 598 SUPERFAMILY Voltage-gated potassium channels 183 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1068 Lele-ChrLele06 6652782 6656051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1068 154 587 Ion Channels AT2G28260 64.747 0.0 602