Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1065 ATGTTACAGAAACCACGATTCAATACTGCCGACCACATGAAATCCCATCCTTCATCCCCAAGATTTCCTCTCTTCTTCAACCTCTTACCTCCTTCTCCATCTCTTAATTTGATCTATATTAATTATTCCTCATTCTTCTTCCCCTACTACTATATCATTATTCTCATGGAGTCCATCGCCAAGGCCAACGGTCACCATCAGAATGGATCCTTCTGCCTGAGCAATGGCACGGCTGACCCGCTGAACTGGGGCGTCGCCGCAGAGTCCCTCAAGGGAAGCCACTTGGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAAGCCGGTTGTCAGGCTTGGCGGCGAGACTCTCACCATCTCTCAGGTGGCTGCCATTGCCTCTCATGACCAGGGCGTGAAGGTGGAGCTTTCGGAGTCGGCCAGGGCCGGCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGAACAAGGGAACTGATAGCTACGGGGTAACCACCGGATTCGGGGCTACCTCTCACCGGAGAACAAAGCAAGGCGCTGCTCTGCAGAAAGAGCTCATCAGATTCTTGAACGCCGGAATATTCGGCAATGGCACAGAGTCTTGCCAAACTCTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTCAGAATCAACACTCTCCTCCAAGGATACTCTGGCATCCGATTTGAAATCCTAGAAGCCATCACCAAGTTCCTCAACCACAACATTACCCCATGCTTGCCACTTCGTGGTACTATCACAGCCTCCGGCGATCTCGTCCCTCTGTCTTACATCGCCGGTTTACTGACCGGAAGACCCAACTCCAAAGCCGTTGGACCCAACGGAGAAGCCCTTAGCCCTAAGGAAGCTTTTCAATTGGCAGGCATCGAGTCCGAGTTCTTCGAATTGCAGCCCAAGGAAGGGCTTGCTCTTGTAAATGGTACCGCCGTTGGTTCTGGCTTGGCTTCCATGGTTCTCTTTGAGGCTAACATTCTAGCCGTGCTCTCTGAAGTTCTTTCTGCCATTTTCGCTGAAGTCATGCAAGGGAAGCCTGAATTTACAGACCATTTGACCCATAAATTAAAGCACCACCCCGGCCAGATTGAAGCCGCTGCGATCATGGAACACATTTTGGATGGAAGCTCCTATGTTAAAGCAGCCAAGAAGTTGCACGAGATGGATCCTCTGCAGAAACCTAAACAAGACCGCTATGCCCTTCGAACTTCACCACAATGGCTTGGCCCTCTCGTTGAAGTTATCAGATTCTCCACCAAATCAATTGAGAGAGAGATCAACTCTGTGAACGACAACCCCTTGATTGACGTTTCAAGGAACAAGGCTCTGCACGGTGGTAACTTCCAGGGTACCCCAATTGGTGTCTCCATGGACAACACTCGTCTGGCTATTGCCTCCATCGGAAAACTCATGTTCGCTCAGTTCTCTGAGCTCGTCAATGACTTCTACAACAATGGCTTACCTTCCAATCTCACTGCCAGTAGAAACCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATCGCCATGGCTTCTTACTGCTCTGAACTTCAATATCTTGCCAATCCCGTGACAAGCCACGTCCAAAGTGCAGAGCAACACAACCAAGATGTGAACTCTCTGGGTTTGATCTCGTCTAGGAAAACAAACGAAGCCATTGAGATCTTAAAGCTCATGTCTTCCACATTTTTGGTCGCTCTCTGCCAAGCAATTGACTTGAGGCACTTGGAAGAGAACTTGAAGAACACAGTGAAGAACACCGTTAGCCAAGTTGCCAAGAGAACTCTGACCACAGGAGTGAATGGAGAACTCCATCCTTCAAGATTCTGCGAGAAGGATTTACTGAAAGTTGTAGACAGAGAGTACGTGTTTGCCTACGCTGATGATCCCTGCAGTGCTCTTTACCCATTGATGCAGAAACTCAGGCAAGTTCTCGTGGACCATGCACTGGCCAATGCCGAGAAGGAGAAGAACACAAGCACATCAATCTTCCAAAAGATTGGAACTTTCGAGGAGGAATTGAAGAATGTGTTGCCGAAGGAAGTTGAGAGCGCAAGAGTTGCATATGAGAACGGCAATTCTGAGATTCCAAACAGGATCAAGGAATGCAGATCATATCCTCTGTACAAGTTTGTGAGAGAGGAGCTGGGAACTCAGTTGCTGACCGGCGAGAGGGTGATTTCACCGGGCGAGGAGTGTGACAAGGTGTTCACAGCTTTATGTCAGGGCAAGATTATTGATCCTCTTCTGGAATGTGTTGGCCAGTGGAATGGAGCCCCTCTTCCAATCTGTTAA 2313 0.495 MLQKPRFNTADHMKSHPSSPRFPLFFNLLPPSPSLNLIYINYSSFFFPYYYIIILMESIAKANGHHQNGSFCLSNGTADPLNWGVAAESLKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIASHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCQTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEALSPKEAFQLAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYADDPCSALYPLMQKLRQVLVDHALANAEKEKNTSTSIFQKIGTFEEELKNVLPKEVESARVAYENGNSEIPNRIKECRSYPLYKFVREELGTQLLTGERVISPGEECDKVFTALCQGKIIDPLLECVGQWNGAPLPIC 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1065 770 FunFam Phenylalanine ammonia-lyase 583 704 - -
Lele06g1065 770 CDD PAL-HAL 115 580 IPR001106 -
Lele06g1065 770 Pfam Aromatic amino acid lyase 117 593 IPR001106 -
Lele06g1065 770 FunFam Phenylalanine ammonia-lyase 72 316 - -
Lele06g1065 770 SUPERFAMILY L-aspartase-like 79 770 IPR008948 GO:0003824
Lele06g1065 770 Gene3D Fumarase/aspartase (Central domain) 317 765 - -
Lele06g1065 770 PANTHER HISTIDINE AMMONIA-LYASE 69 770 IPR001106 -
Lele06g1065 770 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 252 268 IPR022313 GO:0016841
Lele06g1065 770 Gene3D - 72 316 IPR024083 -
Lele06g1065 770 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 79 759 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lele06g1065 770 Gene3D - 583 704 IPR023144 -
Lele06g1065 770 FunFam Phenylalanine ammonia-lyase 317 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1065 Lele-ChrLele06 6613709 6617826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1065 79 770 Monolignol Biosynthesis Gene Families AT2G37040 86.127 0.0 1264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1196 05 7502607 7506049 Lele06g1065 06 6613709 6617826 ECH
Lele06g1065 06 6613709 6617826 Lele05g1196 05 7502607 7506049 ECH
Lele06g1065 06 6613709 6617826 Lele06g1065 06 6613709 6617826 ECH
Lele06g1065 06 6613709 6617826 Lele07g1242 07 7521058 7525026 ECH
Lele06g1065 06 6613709 6617826 Lele08g1047 08 6643679 6647861 ECH
Lele07g1242 07 7521058 7525026 Lele06g1065 06 6613709 6617826 ECH
Lele08g1047 08 6643679 6647861 Lele06g1065 06 6613709 6617826 ECH
Lele06g1065 06 6613709 6617826 Lele07g1242 07 7521058 7525026 hybridization
Lele06g1065 06 6613709 6617826 Lele08g1047 08 6643679 6647861 hybridization