Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1059 ATGAGCGTGAAGTCAGCCTCGGGTCGTTCTAACGGTTGCACAAATGCTGAGGATGATGTGAGAATATCTGTTTCTGAATTGAATTCCAAGGATCAGTCAGAAAACAATGCAGAGTCCCTTAGGAGGACTGCGTTACCCAGTTTGTCTCACAGACCCAGCAACCTGAAAGTTTTCACTGTTCCCGAACTAAAATCAGCCACAAAGAATTTCAGTCGCTCTGTTTTGCTTGGAGAGGGAGGGTTTGGATGTGTATACAAGGGATTCATCAAGAGTGGAGAGGATCCTAACAGAAAACTTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGCCATAAAGAATGGGTGACAGAAGTTAATGTTCTGGGCATTGTTGAGCATCCCAATCTGGTAAAACTAGTGGGTTACTGTGCGGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCCCGTTCAGAGAATCCTCTCTCATGGAGTAGACGATTGAAAATAGCTGAAGACGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTCAGAGACTTCAAATCTTCAAACATCCTCCTGGATGAGCATTGGAATGCAAAGCTATCAGACTTCGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTGGGAACGATGGGATATGCGGCTCCTGAATATGTTCAAACTGGCCGTCTGACATCCAAGAGTGATGTATGGAGCTATGGTGTCTTTCTTTATGAACTCATCACTGGCCGGCGCCCTTTTGATCGAAATCGTCCAAAGGGTGAGCAGAAGCTCTTGGAATGGGTGAGGCCATACTTATCAGATGGGAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAGCACGTTTTTAAGTCAGCTCAAAGACTCGCTATTGTAGCTAACCGATGTTTAGTAAAAAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGCACAATCTTCATTGAGTGCAAGTCCAGAGCTACCCCTGAAGAATTTTGCATCAGCGCAAGGAACCAAATTAAAGAACAAGAGAAGGAATATGGACCTGAAACCTGGAGAAACTAATTGGTTTTTTAGGATATGGAGACCAAAACATCAAAGAGCTAGTTGA 1224 0.4355 MSVKSASGRSNGCTNAEDDVRISVSELNSKDQSENNAESLRRTALPSLSHRPSNLKVFTVPELKSATKNFSRSVLLGEGGFGCVYKGFIKSGEDPNRKLEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLSWSRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLERKHVFKSAQRLAIVANRCLVKNPKNRPKMSEVLDMVNQIAQSSLSASPELPLKNFASAQGTKLKNKRRNMDLKPGETNWFFRIWRPKHQRAS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1059 407 Pfam Protein kinase domain 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1059 407 FunFam Serine/threonine-protein kinase PCRK2 156 364 - -
Lele06g1059 407 ProSiteProfiles Protein kinase domain profile. 70 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1059 407 MobiDBLite consensus disorder prediction 1 46 - -
Lele06g1059 407 PANTHER OS01G0588500 PROTEIN-RELATED 33 354 - -
Lele06g1059 407 FunFam Serine/threonine-protein kinase BIK1 37 155 - -
Lele06g1059 407 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Lele06g1059 407 ProSitePatterns Protein kinases ATP-binding region signature. 76 104 IPR017441 GO:0005524
Lele06g1059 407 CDD STKc_IRAK 76 354 - -
Lele06g1059 407 SUPERFAMILY Protein kinase-like (PK-like) 47 351 IPR011009 -
Lele06g1059 407 Gene3D Transferase(Phosphotransferase) domain 1 156 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1059 Lele-ChrLele06 6583825 6586498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1059 7 348 Glycoside Hydrolase AT3G07070 45.533 7.04e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele06g1059 Pkinase 7e-48 CL0016