Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1046 ATGCAAGGCCTTGAGCTCGTGCCCCCTGCTCCCATTTCCGACTCGACGGCGGAAAACAGAGTCTCCAACGCAGAGGAAGCCACCAAAGGAGAAACAAGGGACATGGAAGTCTCCGAGCCCAAGAAAGATGTCGCAGAGAATCCTGACCCTGTTCTGCCCGTCGGATTCGGCAAGCTTTTCAGATTCGCCGATGGATTAGATTACATTCTGATGGGAATTGGAACGGCTGGGGCAATTGTGCACGGGTGTTCTCTGCCTCTGTTTCTTCGGTTTTTTGCTGATCTTGTGAATTCTTTCGGGTCTAACGCCAACGATGTGAACAAGATGACCCGAGAAGTCATCAAGTATGCATTTTACTTCTTGGTGGTGAGTGCTGCTATATGGGCATCCTCGTGGGCAGAGATATCCTGCTGGATGTGGACCGGAGAGAGGCAGTCGACGAAAATGAGGATAAAGTACCTCGAAGCTGTCTTGAACCAGGACATTCAGTATTTTGACACCGAGGTTCGAACGTCCGACGTTGTTCATGCCATTAACACTGATGCTGTGATGGTCCAAGATGCCATTAGCGAGAAGCTGGGTAATTTCATTCACTACATGGCTACATTCGTGTCTGGATTTGTGGTGGGTTTCACGGCCGTTTGGCAGTTAGCTTTAGTCACACTCGCCGTAGTCCCAATGATAGCTGTGATCGGAGGCATTCACACGGCCACGTTGGCCAAGCTCTCCGGCAAAAGCCAGGAAGCTCTCTCTCAAGCCGGCAACATTGTGGAACAGACAGTAGCGCAAATTCGAGTGGTGCTGGCATTCGTGGGGGAGGGCCGGGCATTACAAGCCTATTCGTCGGCGTTGAAAGTAGTCCAGAAGATTGGCTACAAAACTGGACTCGCTAAAGGAATTGGATTGGGTGCCACTTACTTTGTCGTCTTTTGTTGTTACGCTCTTCTGTTATGGTACGGAGGTTTCCTCGTCAGGCACCACCACACCAATGGCGGACTTGCCATCGCCACCATGTTTGCTGTTATGATAGGTGGACTGGGTTTGGGTCAATCTGCTCCAAGCATGGCTGCATTTACAAAGGCCAGGGTTGCTGCTGCAAAAATTTTCCGCGTGATTGATCACAAGCCAGGGATAGACCGAAACAGTGAATCAGGGTTGGAATTAGAGTCAGGGACGGGACAAGTGGAGCTAAAAAATGTAAACTTCTCGTACCCATCAAGGCCAGATGTTCGGGTCCTCAATGATTTCTCACTAGTTGTGCCTGCTGGGAAGACCATAGCCTTGGTGGGTAGTAGTGGCTCCGGCAAGAGCACCGTCGTCTCTCTCATTGAGAGATTCTATGACCCCACTTCTGGACAAGTTCTGCTTGATGGGCATGACATTAAAGCATTAAAGCTTAGATGGCTGAGAAAGCAAATAGGACTAGTAAGCCAAGGGCCTGCATTATTTGCCACAACAATCAGAGAAAATATACTGTTGGGTCGGCCGGATGCAGACCAGGTTGAGATTGAAGAAGCTGCAAGGGTGGCTAATGCTCATTCGTTCATTGTCAAGCTTCCCGAAGGCTACGATACCCAGGTGGGAGAGAGAGGGCTGCAGCTTTCCGGAGGGCAAAAGCAAAGGAGGGCAATTGCAAGGGCAATGTTGAAAAACCCAGCTATTCTTCTGTTGGATGAAGCAACAAGCGCATTAGACTCCGAGTCAGAAAAGCTGGTTCAAGAAGCGCTAGACCGGTTCATGATCGGTAGAACAACTCTTCCATCTTCCCTGTTGTTGTCGCGGCCACGGTTTTACAGAAAATGTTCATGA 1809 0.4981 MQGLELVPPAPISDSTAENRVSNAEEATKGETRDMEVSEPKKDVAENPDPVLPVGFGKLFRFADGLDYILMGIGTAGAIVHGCSLPLFLRFFADLVNSFGSNANDVNKMTREVIKYAFYFLVVSAAIWASSWAEISCWMWTGERQSTKMRIKYLEAVLNQDIQYFDTEVRTSDVVHAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTATLAKLSGKSQEALSQAGNIVEQTVAQIRVVLAFVGEGRALQAYSSALKVVQKIGYKTGLAKGIGLGATYFVVFCCYALLLWYGGFLVRHHHTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRNSESGLELESGTGQVELKNVNFSYPSRPDVRVLNDFSLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKALKLRWLRKQIGLVSQGPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIVKLPEGYDTQVGERGLQLSGGQKQRRAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLPSSLLLSRPRFYRKCS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1046 602 FunFam ABC transporter B family member 1 58 393 - -
Lele06g1046 602 PANTHER ABC TRANSPORTER B FAMILY 32 586 - -
Lele06g1046 602 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 368 - -
Lele06g1046 602 Pfam ABC transporter 413 562 IPR003439 GO:0005524
Lele06g1046 602 SUPERFAMILY ABC transporter transmembrane region 58 379 IPR036640 GO:0005524|GO:0016020
Lele06g1046 602 MobiDBLite consensus disorder prediction 1 46 - -
Lele06g1046 602 Gene3D - 385 586 IPR027417 -
Lele06g1046 602 Pfam ABC transporter transmembrane region 72 345 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1046 602 FunFam ABC transporter B family member 20 385 593 - -
Lele06g1046 602 CDD ABC_MTABC3_MDL1_MDL2 395 586 - -
Lele06g1046 602 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 395 600 IPR003439 GO:0005524
Lele06g1046 602 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 73 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1046 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 587 IPR027417 -
Lele06g1046 602 SMART AAA_5 422 596 IPR003593 -
Lele06g1046 602 Gene3D ABC transporter type 1, transmembrane domain 58 384 IPR036640 GO:0005524|GO:0016020
Lele06g1046 602 MobiDBLite consensus disorder prediction 24 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1046 Lele-ChrLele06 6496092 6500350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1046 37 596 Calmodulin-binding Proteins AT2G36910 85.536 0.0 959