Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1045 ATGGGTCGAGCTCCTTGCTGCGACAAGGCCAACGTAAAGAAGGGACCATGGTCTCCTGAAGAAGATAAACAGCTAAAGGAGTACATAGAGAAACATGGAACTGGAGGCAATTGGATTGCTCTCCCTCAAAAAGCTGGTCTCAAAAGATGTGGGAAAAGCTGTAGACTAAGATGGCTCAACTATCTCCGGCCTAACATCAAACACGGCGAGTTTTCCGATCATGAAGATAGGATCATCTGCAGCCTCTTTGCTAGCATCGGAAGCAGGTGGTCAGTGATAGCATCTCAGCTGCCTGGAAGGACTGATAATGATATTAAGAACTACTGGAACACCAAGCTTAAGAAGAAGATGATGACCATGAATAATCCTTCTTCAGCTCATCATCATCACTACCAGGCCACCTTTTTACCCGTTCTCCAAAATTCAACTCCATCTCCATCCTCATCGTCAGCATCTTCACCATTATCATTCACAGACAGCACCAACTCTTACTTCCACCCTCCTTATGCTTCTTCATTCTCAGCTGCTGAGCAATCCATTTCCTTCTCGTCGTCGGCGAATTTCTTGTACGGCGGCCATTCCCCTTGTGCTTCTGCTGCTGCTGGCTCTTTCTATCAACCCCAAGAAAGCTTCATGGGTCCCGTGGATCAGCTAGTCGCAGTTAGTTGTAGTTCTTCAAATGGGAGCTGTAATAATAGCAGCCAGATGAGTTATGTGAGAGAAAATGTAGCTGCAGGATATGTAGTAGATTATCAAGGAACTATGGTGGAACAGATGATAGCTGCCAACAATAATATTAACTCTGATTATGTGCAGAATATCATGGGGATGGAAATGGAAGAAAGTGAGAAGGTGATGGTGTGTGATGGGGACTACGTGAATGGTTGGACGGGGAAACAAAATGGAGTGTGGGAGGAGAATCCGCCCTTAGATTATGGGATAGAAGAAATTAAGCAGCTAGTGAGTTCTAATAGTTGCAGCAACTTTTTGTTTGATGGAAGCATGACACAGAAAAGGGCCTTGTACTACTACTGA 1035 0.4483 MGRAPCCDKANVKKGPWSPEEDKQLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDHEDRIICSLFASIGSRWSVIASQLPGRTDNDIKNYWNTKLKKKMMTMNNPSSAHHHHYQATFLPVLQNSTPSPSSSSASSPLSFTDSTNSYFHPPYASSFSAAEQSISFSSSANFLYGGHSPCASAAAGSFYQPQESFMGPVDQLVAVSCSSSNGSCNNSSQMSYVRENVAAGYVVDYQGTMVEQMIAANNNINSDYVQNIMGMEMEESEKVMVCDGDYVNGWTGKQNGVWEENPPLDYGIEEIKQLVSSNSCSNFLFDGSMTQKRALYYY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1045 344 Gene3D - 69 134 - -
Lele06g1045 344 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele06g1045 344 CDD SANT 16 62 IPR001005 -
Lele06g1045 344 SMART sant 13 64 IPR001005 -
Lele06g1045 344 SMART sant 67 115 IPR001005 -
Lele06g1045 344 FunFam Transcription factor RAX2 70 135 - -
Lele06g1045 344 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele06g1045 344 Gene3D - 7 68 - -
Lele06g1045 344 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele06g1045 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Lele06g1045 344 FunFam Transcription factor RAX3 7 68 - -
Lele06g1045 344 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele06g1045 344 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele06g1045 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Lele06g1045 344 PANTHER OS09G0431300 PROTEIN 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1045 Lele-ChrLele06 6481489 6482856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1045 1 118 MYB Transcription Factor Family AT5G57620 86.441 2.05e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g1045 Myb_DNA-binding 2.1e-15 CL0123