Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1035 ATGGCCTTACAGCTTTCTCCAGTTAAGTACAACGTAGATTGTGATTTGTTACATAGCAATATGAAGCAGAGCATGAAAGGTGAGATGTTGCGTAAAGGGCCTTGGCTCCACGAAGAAGACGAGCAACTCACTACCTTTGTTACTTGTCTGGGAGAACGAAGATGGGATTCGCTTGCCAAAGTAGCTGGACTCAGGAGAAGTGGGAAGAGTTGCAGGTTGAGGTGGATGAACTATCTTCGTCCAAATCTGAAGCATGGCCCTTTTAGTGTTGAAGAAGAGCAACTCATTATTCAACTTCACCAGCAATGGGGTAACAAATGGTCAAAGATTGCCCGCAGTCTACCTGGAAGAACCGACAATGAAGTCAAGAATTATTGGAGAACTCATTTCAGAAAGAAAGCACGACTCGAACAAGATAAGTTCCAATATAAACCAGACAACACTGAACAAGGTGCCTTCAGTGAGGAAAACACGAATGATTACGCTTGCGACGATTACAACCAAATGAAGCTTGAATGGCGAGGAAATGTTGGGGAGACTAAGGATAATTCCTCTCAAGCTTTTCCTACATCAGAATGGGAAATGACAAGTTCACCGTACGAGATTCGAGTATCAGATTGGATATCAGAACTGCAAAAAGATCAGAATGAAATTGAATATGAACATCATTGTAATAGCACACAGTCCACTGAATCTTATTCTGCATGGTTTGACTCTGATACATGGGCTTATTCTTATTCAGGTTCCATCTGGGACATGAATTGA 765 0.4196 MALQLSPVKYNVDCDLLHSNMKQSMKGEMLRKGPWLHEEDEQLTTFVTCLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPNLKHGPFSVEEEQLIIQLHQQWGNKWSKIARSLPGRTDNEVKNYWRTHFRKKARLEQDKFQYKPDNTEQGAFSEENTNDYACDDYNQMKLEWRGNVGETKDNSSQAFPTSEWEMTSSPYEIRVSDWISELQKDQNEIEYEHHCNSTQSTESYSAWFDSDTWAYSYSGSIWDMN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1035 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Lele06g1035 254 Gene3D - 32 84 - -
Lele06g1035 254 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Lele06g1035 254 SUPERFAMILY Homeodomain-like 31 126 IPR009057 -
Lele06g1035 254 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Lele06g1035 254 CDD SANT 34 79 IPR001005 -
Lele06g1035 254 CDD SANT 87 130 IPR001005 -
Lele06g1035 254 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 26 212 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele06g1035 254 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Lele06g1035 254 Pfam Myb-like DNA-binding domain 86 129 IPR001005 -
Lele06g1035 254 FunFam Myb transcription factor 32 84 - -
Lele06g1035 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 79 IPR017930 -
Lele06g1035 254 Gene3D - 86 158 - -
Lele06g1035 254 SMART sant 31 81 IPR001005 -
Lele06g1035 254 SMART sant 84 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1035 Lele-ChrLele06 6430608 6431654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1035 28 135 MYB Transcription Factor Family AT5G59780 64.815 8.42e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g1035 Myb_DNA-binding 3e-11 CL0123