Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1033 ATGCTCCAACTAAACTGCATTGTGCCATTCTTCATTCTGGTGTCTTTTTCACCACTTGGAATAGCAATGCTGAACCTCACTCTTACTGGCCAGCATCCCCATCCCGATTCTGTCGTTCGAGAGTTTCACAGGAAAGTGAATGCTTCAATAACGAGAAGGCAGATGCTAGCAGAGTCGCAGATACAAGAGTCGTCATGTTTAACAGGGAACCCAATTGACGATTGTTGGAAATGCGACCCAGATTGGCCCAACAACAGGCAGAGGTTAGCTGAATGTGCTATTGGGTTCGGGCAGTACGCAAAGGGAGGCCAGGGCGGCGAATTCTACATCATCACTGACTCGTCCGACGACGACGCCGTCAACCCGAAACCTGGTACACTCAGATACGCCGTGATCCAGACGCAGCCACTGTGGATAGTGTTCCCCAGTAATATGATGATTAAATTGTCTCAGGAGCTCATCTTCAATAGTTACAAAACTCTTGATGGCCGTGGTGCTGACGTTCACATTGTGGGCAGTGGGTGCATTACTCTCCAGTATATAAGCAATGTCATCATTCACAACATTCACATCCATCACTGTCACCCCTCAGGTCACTAA 600 0.4817 MLQLNCIVPFFILVSFSPLGIAMLNLTLTGQHPHPDSVVREFHRKVNASITRRQMLAESQIQESSCLTGNPIDDCWKCDPDWPNNRQRLAECAIGFGQYAKGGQGGEFYIITDSSDDDAVNPKPGTLRYAVIQTQPLWIVFPSNMMIKLSQELIFNSYKTLDGRGADVHIVGSGCITLQYISNVIIHNIHIHHCHPSGH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1033 199 Gene3D - 69 199 IPR012334 -
Lele06g1033 199 PRINTS Pollen allergen Amb family signature 152 168 IPR018082 -
Lele06g1033 199 PRINTS Pollen allergen Amb family signature 116 141 IPR018082 -
Lele06g1033 199 PRINTS Pollen allergen Amb family signature 92 109 IPR018082 -
Lele06g1033 199 PANTHER PECTATE LYASE 18-RELATED 27 198 IPR045032 GO:0030570
Lele06g1033 199 SUPERFAMILY Pectin lyase-like 70 197 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1033 Lele-ChrLele06 6427090 6427818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1033 1 199 Polysaccharide Lyase AT3G53190 71.287 3.85e-90 270