Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1011 ATGAAGGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAAATCATATAGGCGAGCAGCACAGTATATTTGCTTTGAAAACGGAAAGAGCCTGCTTGAATTATTGAGAGCATGCAGGGGAACTCCGCTGCTTACATTGGGGATGATAATTCAAAATTTTGTTTGTTCTCCACCTCGAGCAAAATTTTGCATGATGTTTTCCCTCTTCACGAGTCTCCCAGATCGGTTCCAGCCTCCAAACCGTCAAGTGATTCTGAAGTGTGCAACTCATCACAGATTAACAAACATTGGAAGAAAAGAACAAGGTTGGCTTTTATATCTGACAACAAATCGGGTTAGTTGCTCAAAGTCTTCTGAGACTGCTTCTGTGCCTATCCCATCACAAAAGAAGTCTACGCAGAGGGATCAGCGGTTACATAAATTAGTTTTTGAAGAAGGTGGATTGCCTGATGGAACAGAGGTAGCTTATTATGGACGTGGACACTGGACAGGTCAGTATGTTGTACAAATGAGTTTTATGTTTGAATTTGCTATGAAGGTCAGCCCATCACAATTTGAGGTCCATGCAGGCTGGGCTTCTCACAGGAAACCTTATGCATACATCTACACTTCAAATGGGGTGTCTCTACATGAATTGGCAATTTCTCTTTGGAAAGGCCACAAGTACGCTGCAAAGGACAATGATGATGTTTGCATTATTTGTTTGGATGGTGGAAATCTGTTGCTTTTTGATGGATGCCCAAGGGCATTTCATAAAGATTGTGTATATTGTAAGAGACCTCATTCCATCAATCTGACCCATTTCATGTGCATTTTGAGTTTTGATCCTGCTCTTGTAGTAAGAGAAATGATGAAGGAGGAAGAAGAAAAATGCAATGATGGAACATATTTTGAGATGAGTAAATTGACTATGTCCTCTGTTGTACATATAGTACAAAACTACTTTGAAGCAGTTGGAAGGGAAAAAAGAAACTACTTTGAAGCAGTTGGAAGGGAAAAAAGAAACTACTTTGAAGCAGTTGGAAGGAAAAAAAGAAACCACTTTGAAGCATACTTTTCCTATGTTTCATATGATGAGATGGTCATCTTCCAAGTGTACCATCGTGTTCAATTGAAATGTACAGAATGCGCATCTCTATTAAGCATTCCACGCGGTGACCGGTACTGTAAGTTTTGCCAAAACATGTTCCAGAGGGGAAGATTTGTAGCACACAATGCCAATGCAGTGGCTGCTGGAAGGGTTGACGGGGTTGATCCTATTGAACAGATAACCAAGAGATGCATTCGCATTGTCAAAGACATTGAAGCTGAGCTGAGCGGCTGTGCTTTATGCAGGGGTTATGACTTCAGCAAGTCAGGGTTTGGTTCTCGCACAATTATACTTTGTGACCAGTGTGAAAAGGAATATCATGTAGGCTGTTTGAGGGATCATAAGATGGCATATTTGAAGAAGTTCTTGGTTAGGGAGGCTGAGAAACTTCCTGACTCTCTCGTGGCTGTTATAAAGACAAAGCAAAAGGAAAAAGGTTTGCAGTCTTTCAATGATATTGATGTAAGATGGAGGCTTCTTAATGGCAAAATTGAATCTCCTGAAACCAGGCCATTGCTGTCAGAGGCTGTTTCAATCTTTCATGAATGCTTTGATCCTATAGTTGATTCAACTATTGGTCGTGACCTTATCCCAGCCATGGTTTTTGGAAGGAATGTGCGGAGTCAAGAGTTTGGAGGAATGTATTGTGCAATATTGTCGGTCAATCCAACTGTTGTATCAGCTGGCATGCTTCGAATTTTTGGTAAAGATGTGGCTGAACTTCCTTTAGTAGCAACAAGCAGTGATAATCATGGGAAGGGCTACTTCCAATTACTCTTCACCTGCATTCAGAGACTGCTGGCAATGTTGAACGCAAAGATGCTTGTGCTACCAGCTGCTGAAGAAGTAGAATCCATATGGACAGATAAATTTGGGTTCCGCAAGATGAAACCAGAGCAGATTACCAGTTGTAGAAAGAACTACAGTCAGATGGTGACATTCCAAGGGACTTCCATGCTTCAAAAAATGGTTCCGCACTGTCAATTTTCAATGTGA 2088 0.4119 MKVIPPSQFEIHACKSYRRAAQYICFENGKSLLELLRACRGTPLLTLGMIIQNFVCSPPRAKFCMMFSLFTSLPDRFQPPNRQVILKCATHHRLTNIGRKEQGWLLYLTTNRVSCSKSSETASVPIPSQKKSTQRDQRLHKLVFEEGGLPDGTEVAYYGRGHWTGQYVVQMSFMFEFAMKVSPSQFEVHAGWASHRKPYAYIYTSNGVSLHELAISLWKGHKYAAKDNDDVCIICLDGGNLLLFDGCPRAFHKDCVYCKRPHSINLTHFMCILSFDPALVVREMMKEEEEKCNDGTYFEMSKLTMSSVVHIVQNYFEAVGREKRNYFEAVGREKRNYFEAVGRKKRNHFEAYFSYVSYDEMVIFQVYHRVQLKCTECASLLSIPRGDRYCKFCQNMFQRGRFVAHNANAVAAGRVDGVDPIEQITKRCIRIVKDIEAELSGCALCRGYDFSKSGFGSRTIILCDQCEKEYHVGCLRDHKMAYLKKFLVREAEKLPDSLVAVIKTKQKEKGLQSFNDIDVRWRLLNGKIESPETRPLLSEAVSIFHECFDPIVDSTIGRDLIPAMVFGRNVRSQEFGGMYCAILSVNPTVVSAGMLRIFGKDVAELPLVATSSDNHGKGYFQLLFTCIQRLLAMLNAKMLVLPAAEEVESIWTDKFGFRKMKPEQITSCRKNYSQMVTFQGTSMLQKMVPHCQFSM 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1011 695 SUPERFAMILY FYVE/PHD zinc finger 433 479 IPR011011 -
Lele06g1011 695 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 438 496 IPR013083 -
Lele06g1011 695 PANTHER AUTOIMMUNE REGULATOR 375 687 - -
Lele06g1011 695 SUPERFAMILY FYVE/PHD zinc finger 225 272 IPR011011 -
Lele06g1011 695 Pfam Tify domain binding domain 2 39 IPR032308 -
Lele06g1011 695 Pfam Tify domain binding domain 181 215 IPR032308 -
Lele06g1011 695 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 539 666 IPR016181 -
Lele06g1011 695 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 317 IPR013083 -
Lele06g1011 695 SMART PHD_3 441 493 IPR001965 -
Lele06g1011 695 SMART PHD_3 231 275 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1011 Lele-ChrLele06 6270076 6277317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1011 376 693 PHD Transcription Factor Family AT2G36720 52.507 6.83e-119 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1011 06 6270076 6277317 Lele07g1193 07 7200312 7214440 hybridization
Lele06g1011 06 6270076 6277317 Lele08g0996 08 6323649 6331350 hybridization