Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1006 ATGAACAGCGACAACGTTGAAGGCCAAGGCCAAGTAGGCTACTTTGTGAATCCTCTCATCATCTCCGGCGCCGGCATCATCTGCTCCTGTGTCGCCTTAGCCACGTACCACTTCATCCTCTTCAGGCTCTGCCTTCAAGGCCGACGACAGTTGCAGCAAATCGCTCAGCCGATAAGCCCCCCTGCCGATGACATTCCCTGTGGCGTCGACCCTGAAATCCTCAAAAAAATCCCAATTCTGCCTTATTCTCACAAGAAAGATGACGCCTTTCGTTTGGACCAGACTGAATGCGCGATTTGCTTGGGCGAATTGCAGGATGGAGAAAAGGTTCGATTATTGCCTTCTTGTAGCCATGCGTTTCACATACCTTGTATCGATCTCTGGTTCGCTCAGAATTCCAATTGTCCCATTTGTCGAGCGCCGTTACTTTTAGCCCCTCCGCCATCCCTGCCAGTAGCTTCGGAAACTGTTGTCGATGCTCAAGAAATAAAGGTTTGTCATCAAAATGATCATCATAAGATCGTCGCTTCTGATCTTTTGACGAGTGCTTCTGCTTCGACGTCACGAGGAGGGCATCTTGGAGCGGCCACGCTTGAGCACTCTCTCTCTATGGCGTATCGTCACGAACAGGAAAAGCCGATGATGATGGGGATGAAGAGGTCTCTATCCATGGATCATTCGTCGTATGTTTCTGTCAGCATACAAAGGGACGAGGAAAATAATAAAGCTGCTGCTTCATCTTCTTCTTCGCCCTCTTTCGCTGAAGGGATTGGGATTGCGCAAGCTAAAGCGCTTGATCAGGTGTCGTCCATGTTGATGATGTCTTTCGCCCAGTTCCGGAACAGTAGAAACGAGAGATCCAAAGGCATTCTACCGAATTGA 882 0.4932 MNSDNVEGQGQVGYFVNPLIISGAGIICSCVALATYHFILFRLCLQGRRQLQQIAQPISPPADDIPCGVDPEILKKIPILPYSHKKDDAFRLDQTECAICLGELQDGEKVRLLPSCSHAFHIPCIDLWFAQNSNCPICRAPLLLAPPPSLPVASETVVDAQEIKVCHQNDHHKIVASDLLTSASASTSRGGHLGAATLEHSLSMAYRHEQEKPMMMGMKRSLSMDHSSYVSVSIQRDEENNKAAASSSSSPSFAEGIGIAQAKALDQVSSMLMMSFAQFRNSRNERSKGILPN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1006 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 143 IPR013083 -
Lele06g1006 293 SUPERFAMILY RING/U-box 89 145 - -
Lele06g1006 293 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Lele06g1006 293 MobiDBLite consensus disorder prediction 232 253 - -
Lele06g1006 293 CDD RING-H2_PA-TM-RING 96 139 - -
Lele06g1006 293 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 142 IPR044675 -
Lele06g1006 293 Pfam Ring finger domain 96 139 IPR001841 -
Lele06g1006 293 SMART ring_2 97 138 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1006 Lele-ChrLele06 6238123 6239004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1006 25 263 C3H Transcription Factor Family AT5G17600 24.535 5.05e-23 95.5