Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0989 ATGGTTTCTTACGCTTCTTCGCACCATGAAACTGATATTCCTCAAGCACCGACACAACAATCGATCAAGCATGGTTACCCCTCTTATTCGGCGAAGATCAATCAACAAATGGCTCTCAGTGACGATGATGAAGGCTGCTTCGGAGCAGAGGGCAACGTTAGCTCCGGTGATAGGAGGAAAGTGTCGCAGTGGCACAGAATGAAGTGGACGGACACTATGGTTAGGCTCTTGATAATGGCGGTTTATTATATTGGCGATAATGAATGTGGTTCAGACGGGGCAGATAAGAAGAAACCTTCGGGTCTGTTACAAAAGAAAGGCAAGTGGAAATCGGTGTCAAGGGCTATGATGGAGAAGGGCTTTTTCGTTTCTCCTCAACAATGCGAGGACAAGTTTAATGATTTGAATAAGAGGTACAAGAGAGTGAATGATATTCTGGGTAAAGGAACAGCTTGTCTGGTGGTGGAAAATCACAGCTTGTTGGAGACGATGGACTTGTCACCAAAAAGGAAAGAGGAAGTTCGAAAATTGCTCAATTCTAAGCACCTTTTCTTCAGGGAAATGTGTGCTTACCACAATAGTTGTGGCCATGGCGGCGGCGCCACCTGTGGGCCGCCGGAACAACAATCCCCGGAGGTGGGAACAGAGCCATCTCAAGCGCCTCCTCAACCACAGCAACATCACCGACAGTGTTCGCACTCACCGGAAGTTGGGATGACTAATTTGAGAAAGCCAGAATCAGAAGGACTCGAGATTTTGAAGGAGGTAAGCAGGGAAGAGGATGAAGAAGACGACGAAGACGATGAGTCAGAGGATTCTTCTCATGAGGACGAAGAAGAGTTAGGAGAAGGCGTTTCAAGAGGTCGTAAAACTGGGAACGCACATGAATTAGACGAGGATGAGAATTATGAAGGAAGAGCATCAACGAAGAGATCAAGAAAAGAACAAACCTGTTGGTCGTCGTCGAAGCTAATGCAGGAAACGAGCCCCGAAGTGATGGGTGTGTTACAAGACGGAGGGAGAAGCGCGTGGGAGAAGAGGCAATGGATGAAGAGGAAGGCAATGCAGTTGGAGGAACAGCAACTGAGGTACGAGGTAGAAGCATTTGAGCTGGAGAAGCAGAGGCTGAAATGGGCGAGATTTAGCAGCAAGAAAGAGAGGGACATGGAAAGAGCAAAGCTTGAGAATCAAAGGAGGCAACTGGAGAATGAGAAGATGGTTTTGCTATTACGGCGGAAGGATCTTGAGCTGTTGAGTCAATCTTCACCATCACCGACAACAGCAGCAGCAACATTCTTGTAA 1302 0.4739 MVSYASSHHETDIPQAPTQQSIKHGYPSYSAKINQQMALSDDDEGCFGAEGNVSSGDRRKVSQWHRMKWTDTMVRLLIMAVYYIGDNECGSDGADKKKPSGLLQKKGKWKSVSRAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENHSLLETMDLSPKRKEEVRKLLNSKHLFFREMCAYHNSCGHGGGATCGPPEQQSPEVGTEPSQAPPQPQQHHRQCSHSPEVGMTNLRKPESEGLEILKEVSREEDEEDDEDDESEDSSHEDEEELGEGVSRGRKTGNAHELDEDENYEGRASTKRSRKEQTCWSSSKLMQETSPEVMGVLQDGGRSAWEKRQWMKRKAMQLEEQQLRYEVEAFELEKQRLKWARFSSKKERDMERAKLENQRRQLENEKMVLLLRRKDLELLSQSSPSPTTAAATFL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0989 433 MobiDBLite consensus disorder prediction 202 337 - -
Lele06g0989 433 Coils Coil 354 374 - -
Lele06g0989 433 Pfam Myb/SANT-like DNA-binding domain 66 190 IPR044822 -
Lele06g0989 433 MobiDBLite consensus disorder prediction 208 237 - -
Lele06g0989 433 MobiDBLite consensus disorder prediction 1 23 - -
Lele06g0989 433 PANTHER F16F4.11 PROTEIN-RELATED 6 420 - -
Lele06g0989 433 MobiDBLite consensus disorder prediction 280 317 - -
Lele06g0989 433 Gene3D - 69 141 - -
Lele06g0989 433 MobiDBLite consensus disorder prediction 257 279 - -
Lele06g0989 433 Coils Coil 384 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0989 Lele-ChrLele06 6143269 6144570 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele06g0989 Myb_DNA-bind_4 4e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0989 06 6143269 6144570 Lele13g1700 13 25593394 25598942 CCT
Lele06g0989 06 6143269 6144570 Lele14g1642 14 23989706 23995384 CCT
Lele06g0989 06 6143269 6144570 Lele15g0713 15 4116922 4122457 CCT
Lele06g0989 06 6143269 6144570 Lele16g0720 16 4054315 4059996 CCT
Lele06g0989 06 6143269 6144570 Lele06g0989 06 6143269 6144570 ECH
Lele06g0989 06 6143269 6144570 Lele07g1169 07 7063199 7064653 hybridization
Lele06g0989 06 6143269 6144570 Lele08g0977 08 6202803 6204113 hybridization